Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRRM3A6NNA2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRRM3A6NNA2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 AC016027.1-202ENST00000607927 1699 ntBASIC16.92■□□□□ 0.3
SRRM3A6NNA2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 AC007292.2-201ENST00000593524 1812 ntBASIC16.92■□□□□ 0.3
SRRM3A6NNA2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 RNA5SP421-201ENST00000516864 134 ntBASIC16.92■□□□□ 0.3
SRRM3A6NNA2 AC087641.1-201ENST00000557561 1021 ntBASIC16.92■□□□□ 0.3
SRRM3A6NNA2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM3A6NNA2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 GGT3P-204ENST00000453783 1664 ntBASIC16.91■□□□□ 0.3
SRRM3A6NNA2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 CDC14C-201ENST00000428251 1719 ntBASIC16.91■□□□□ 0.3
SRRM3A6NNA2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.91■□□□□ 0.3
SRRM3A6NNA2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 KRT18P27-201ENST00000427733 1299 ntBASIC16.91■□□□□ 0.3
SRRM3A6NNA2 AC068472.1-201ENST00000474589 881 ntBASIC16.91■□□□□ 0.3
SRRM3A6NNA2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 AC018845.2-201ENST00000568326 409 ntBASIC16.91■□□□□ 0.3
SRRM3A6NNA2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms