Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 AL590640.2-201ENST00000457038 527 ntBASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 KRT18P25-201ENST00000508931 1278 ntBASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 AC026410.3-201ENST00000514280 936 ntBASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 AP001582.1-201ENST00000525856 295 ntBASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 AC007663.3-201ENST00000609632 465 ntBASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 AP000346.4-201ENST00000614827 381 ntBASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TMEM88BA6NKF7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.58■□□□□ 0.57
TMEM88BA6NKF7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM88BA6NKF7 AL691432.1-201ENST00000596308 1422 ntBASIC18.58■□□□□ 0.57
TMEM88BA6NKF7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.58■□□□□ 0.57
TMEM88BA6NKF7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
TMEM88BA6NKF7 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM88BA6NKF7 TUBBP5-203ENST00000508529 1334 ntBASIC18.58■□□□□ 0.57
TMEM88BA6NKF7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM88BA6NKF7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 MSRA-203ENST00000441698 788 ntTSL 2 BASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 RN7SL774P-201ENST00000577467 290 ntBASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 RN7SL574P-201ENST00000581512 297 ntBASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 AP005019.2-201ENST00000615104 511 ntBASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 AL354751.1-201ENST00000412768 1863 ntBASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM88BA6NKF7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 LINC02012-201ENST00000608206 1725 ntBASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 SERPINA13P-202ENST00000478994 924 ntBASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 SLED1-202ENST00000512051 380 ntBASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 AC091544.8-201ENST00000619490 361 ntBASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.57■□□□□ 0.56
TMEM88BA6NKF7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88BA6NKF7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms