Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 MIR4492-201ENST00000581627 80 ntBASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 AC106881.1-201ENST00000605849 3329 ntBASIC14.03□□□□□ -0.16
MEIS3P1A6NDR6 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MEIS3P1A6NDR6 AC233702.3-201ENST00000578656 1387 ntBASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 CHCHD2P8-201ENST00000429873 447 ntBASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 BX276092.5-203ENST00000456199 560 ntBASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 AL353135.1-201ENST00000606729 504 ntBASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 CICP13-201ENST00000422015 2789 ntBASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
MEIS3P1A6NDR6 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 NSUN5P1-202ENST00000421140 1535 ntBASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 NSUN5P2-203ENST00000457352 1529 ntBASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 SIGLEC16-201ENST00000599858 1437 ntBASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms