Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SBNO1A3KN83 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC21.73■■□□□ 1.07
SBNO1A3KN83 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SBNO1A3KN83 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SBNO1A3KN83 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SBNO1A3KN83 C1QBPP1-201ENST00000400117 770 ntBASIC21.73■■□□□ 1.07
SBNO1A3KN83 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC21.73■■□□□ 1.07
SBNO1A3KN83 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC21.73■■□□□ 1.07
SBNO1A3KN83 KRT8P13-201ENST00000463294 1010 ntBASIC21.73■■□□□ 1.07
SBNO1A3KN83 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SBNO1A3KN83 RHOQP1-201ENST00000555758 579 ntBASIC21.73■■□□□ 1.07
SBNO1A3KN83 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC21.73■■□□□ 1.07
SBNO1A3KN83 RN7SL560P-201ENST00000577943 264 ntBASIC21.73■■□□□ 1.07
SBNO1A3KN83 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SBNO1A3KN83 HADH-212ENST00000638621 741 ntTSL 5 BASIC21.73■■□□□ 1.07
SBNO1A3KN83 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SBNO1A3KN83 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SBNO1A3KN83 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SBNO1A3KN83 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SBNO1A3KN83 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SBNO1A3KN83 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SBNO1A3KN83 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SBNO1A3KN83 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SBNO1A3KN83 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SBNO1A3KN83 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 RNF216P1-203ENST00000404404 2427 ntBASIC21.72■■□□□ 1.07
SBNO1A3KN83 MSTO2P-201ENST00000314835 1709 ntBASIC21.72■■□□□ 1.07
SBNO1A3KN83 RERG-209ENST00000546331 1383 ntTSL 2 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SBNO1A3KN83 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SBNO1A3KN83 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SBNO1A3KN83 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SBNO1A3KN83 AC092506.1-202ENST00000401022 528 ntBASIC21.72■■□□□ 1.07
SBNO1A3KN83 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SBNO1A3KN83 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SBNO1A3KN83 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SBNO1A3KN83 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SBNO1A3KN83 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC21.72■■□□□ 1.07
SBNO1A3KN83 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SBNO1A3KN83 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SBNO1A3KN83 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SBNO1A3KN83 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SBNO1A3KN83 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SBNO1A3KN83 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SBNO1A3KN83 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SBNO1A3KN83 PCDHB18P-201ENST00000524813 2368 ntBASIC21.71■■□□□ 1.07
SBNO1A3KN83 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
SBNO1A3KN83 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.71■■□□□ 1.07
SBNO1A3KN83 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC21.71■■□□□ 1.07
SBNO1A3KN83 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC21.71■■□□□ 1.07
SBNO1A3KN83 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC21.71■■□□□ 1.07
SBNO1A3KN83 RNA5SP423-201ENST00000517127 109 ntBASIC21.71■■□□□ 1.07
SBNO1A3KN83 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC21.71■■□□□ 1.07
SBNO1A3KN83 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC21.71■■□□□ 1.07
SBNO1A3KN83 AP001063.1-201ENST00000568332 529 ntBASIC21.71■■□□□ 1.07
SBNO1A3KN83 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SBNO1A3KN83 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC21.71■■□□□ 1.07
SBNO1A3KN83 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
SBNO1A3KN83 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SBNO1A3KN83 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC21.71■■□□□ 1.07
SBNO1A3KN83 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SBNO1A3KN83 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SBNO1A3KN83 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SBNO1A3KN83 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SBNO1A3KN83 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SBNO1A3KN83 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SBNO1A3KN83 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SBNO1A3KN83 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SBNO1A3KN83 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SBNO1A3KN83 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SBNO1A3KN83 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SBNO1A3KN83 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SBNO1A3KN83 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SBNO1A3KN83 AGER-203ENST00000375065 665 ntTSL 2 BASIC21.7■■□□□ 1.06
SBNO1A3KN83 OLR1-203ENST00000432556 950 ntTSL 2 BASIC21.7■■□□□ 1.06
SBNO1A3KN83 KRT18P64-201ENST00000434946 1219 ntBASIC21.7■■□□□ 1.06
SBNO1A3KN83 VDAC1P7-201ENST00000462417 847 ntBASIC21.7■■□□□ 1.06
SBNO1A3KN83 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC21.7■■□□□ 1.06
SBNO1A3KN83 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC21.7■■□□□ 1.06
SBNO1A3KN83 AC243562.2-201ENST00000561247 970 ntBASIC21.7■■□□□ 1.06
SBNO1A3KN83 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SBNO1A3KN83 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SBNO1A3KN83 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SBNO1A3KN83 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms