Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB13Q9Y5F0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHB13Q9Y5F0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB13Q9Y5F0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB13Q9Y5F0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB13Q9Y5F0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PCDHB13Q9Y5F0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHB13Q9Y5F0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHB13Q9Y5F0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHB13Q9Y5F0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHB13Q9Y5F0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB13Q9Y5F0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
PCDHB13Q9Y5F0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 AC092865.5-201ENST00000545435 363 ntBASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 AC010327.4-202ENST00000591484 748 ntBASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 AL592424.1-201ENST00000563624 1536 ntBASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB13Q9Y5F0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 AL078595.1-201ENST00000404458 226 ntBASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 SDR42E1P3-201ENST00000438345 502 ntBASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 AC026616.1-201ENST00000523157 525 ntBASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 AL138918.1-201ENST00000568306 659 ntBASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 MIR4469-201ENST00000583919 79 ntBASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 AC027307.2-201ENST00000591252 911 ntBASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 AC073389.1-201ENST00000595595 795 ntBASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 AC006449.6-201ENST00000612330 2296 ntBASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 AC008741.2-201ENST00000612792 3115 ntBASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHB13Q9Y5F0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms