Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX4Q9UIU6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.33■□□□□ 0.36
SIX4Q9UIU6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.33■□□□□ 0.36
SIX4Q9UIU6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.33■□□□□ 0.36
SIX4Q9UIU6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.33■□□□□ 0.36
SIX4Q9UIU6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.33■□□□□ 0.36
SIX4Q9UIU6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SIX4Q9UIU6 AL390754.1-201ENST00000619088 582 ntBASIC17.33■□□□□ 0.36
SIX4Q9UIU6 AL590560.3-201ENST00000623350 461 ntBASIC17.33■□□□□ 0.36
SIX4Q9UIU6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
SIX4Q9UIU6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX4Q9UIU6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SIX4Q9UIU6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX4Q9UIU6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SIX4Q9UIU6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
SIX4Q9UIU6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX4Q9UIU6 AC134407.2-201ENST00000625089 1978 ntBASIC17.33■□□□□ 0.36
SIX4Q9UIU6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SIX4Q9UIU6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX4Q9UIU6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SIX4Q9UIU6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 BNIP3P1-202ENST00000550043 1585 ntBASIC17.32■□□□□ 0.36
SIX4Q9UIU6 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.32■□□□□ 0.36
SIX4Q9UIU6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 AC100757.3-201ENST00000622361 1406 ntBASIC17.32■□□□□ 0.36
SIX4Q9UIU6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 KRT8P12-202ENST00000472924 1397 ntBASIC17.32■□□□□ 0.36
SIX4Q9UIU6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.32■□□□□ 0.36
SIX4Q9UIU6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 AC004987.2-201ENST00000395959 1148 ntBASIC17.31■□□□□ 0.36
SIX4Q9UIU6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 HIST3H2BA-201ENST00000436555 524 ntBASIC17.31■□□□□ 0.36
SIX4Q9UIU6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 EEF1DP4-201ENST00000446006 880 ntBASIC17.31■□□□□ 0.36
SIX4Q9UIU6 AC093214.1-201ENST00000511688 1107 ntBASIC17.31■□□□□ 0.36
SIX4Q9UIU6 IGHV3-42-201ENST00000520410 361 ntBASIC17.31■□□□□ 0.36
SIX4Q9UIU6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SIX4Q9UIU6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms