Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTN3Q9P232 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTN3Q9P232 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 DOC2GP-204ENST00000639052 2548 ntBASIC17.45■□□□□ 0.38
CNTN3Q9P232 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTN3Q9P232 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTN3Q9P232 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 AC236430.1-201ENST00000402231 743 ntBASIC17.45■□□□□ 0.38
CNTN3Q9P232 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 AL512361.1-201ENST00000554200 418 ntBASIC17.45■□□□□ 0.38
CNTN3Q9P232 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 AC010336.2-201ENST00000564226 506 ntBASIC17.45■□□□□ 0.38
CNTN3Q9P232 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNTN3Q9P232 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTN3Q9P232 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNTN3Q9P232 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTN3Q9P232 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.45■□□□□ 0.38
CNTN3Q9P232 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CNTN3Q9P232 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTN3Q9P232 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
CNTN3Q9P232 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTN3Q9P232 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CNTN3Q9P232 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTN3Q9P232 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.44■□□□□ 0.38
CNTN3Q9P232 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTN3Q9P232 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.44■□□□□ 0.38
CNTN3Q9P232 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTN3Q9P232 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTN3Q9P232 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.44■□□□□ 0.38
CNTN3Q9P232 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTN3Q9P232 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTN3Q9P232 SERBP1P3-201ENST00000459980 809 ntBASIC17.44■□□□□ 0.38
CNTN3Q9P232 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.44■□□□□ 0.38
CNTN3Q9P232 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
CNTN3Q9P232 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTN3Q9P232 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTN3Q9P232 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTN3Q9P232 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTN3Q9P232 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTN3Q9P232 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTN3Q9P232 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTN3Q9P232 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTN3Q9P232 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTN3Q9P232 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CNTN3Q9P232 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTN3Q9P232 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTN3Q9P232 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CNTN3Q9P232 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CNTN3Q9P232 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.43■□□□□ 0.38
CNTN3Q9P232 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTN3Q9P232 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTN3Q9P232 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTN3Q9P232 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
CNTN3Q9P232 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.43■□□□□ 0.38
CNTN3Q9P232 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTN3Q9P232 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CNTN3Q9P232 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTN3Q9P232 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTN3Q9P232 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTN3Q9P232 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CNTN3Q9P232 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTN3Q9P232 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTN3Q9P232 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTN3Q9P232 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTN3Q9P232 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTN3Q9P232 RN7SL618P-201ENST00000477850 296 ntBASIC17.43■□□□□ 0.38
CNTN3Q9P232 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.43■□□□□ 0.38
CNTN3Q9P232 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTN3Q9P232 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.43■□□□□ 0.38
CNTN3Q9P232 AC008738.7-201ENST00000609744 511 ntBASIC17.43■□□□□ 0.38
CNTN3Q9P232 AC008761.3-201ENST00000624803 892 ntBASIC17.43■□□□□ 0.38
CNTN3Q9P232 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.43■□□□□ 0.38
CNTN3Q9P232 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTN3Q9P232 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CNTN3Q9P232 AL691432.1-201ENST00000596308 1422 ntBASIC17.43■□□□□ 0.38
CNTN3Q9P232 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTN3Q9P232 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTN3Q9P232 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTN3Q9P232 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTN3Q9P232 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTN3Q9P232 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.43■□□□□ 0.38
CNTN3Q9P232 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTN3Q9P232 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTN3Q9P232 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTN3Q9P232 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms