Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.8■□□□□ 0.76
ECHDC1Q9NTX5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 AC018695.7-201ENST00000624587 2492 ntBASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 AC069224.1-201ENST00000566372 1715 ntBASIC19.79■□□□□ 0.76
ECHDC1Q9NTX5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 CDC14C-201ENST00000428251 1719 ntBASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.78■□□□□ 0.76
ECHDC1Q9NTX5 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ECHDC1Q9NTX5 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.77■□□□□ 0.75
ECHDC1Q9NTX5 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
ECHDC1Q9NTX5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
ECHDC1Q9NTX5 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
ECHDC1Q9NTX5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 LINC02447-202ENST00000501888 2146 ntBASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms