Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 GPR182-203ENST00000622922 591 ntBASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 BOLA2P3-201ENST00000404566 256 ntBASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM7Q9NR12 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 KRT8P12-202ENST00000472924 1397 ntBASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 AC024267.1-201ENST00000582320 895 ntBASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM7Q9NR12 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 KRT8P44-201ENST00000441609 1350 ntBASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 PCDHA14-201ENST00000506751 2298 ntBASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 REXO1L8P-201ENST00000604378 1897 ntBASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms