Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 BCAR1-209ENST00000546196 1340 ntBASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 AP005117.1-202ENST00000581724 1908 ntBASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 AC016027.1-202ENST00000607927 1699 ntBASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
UPF3BQ9BZI7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 ZNF259P1-201ENST00000407656 1365 ntBASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 AC109635.5-201ENST00000533593 962 ntBASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 KRT19P2-202ENST00000557173 1012 ntBASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.46■□□□□ 0.71
UPF3BQ9BZI7 U82695.1-201ENST00000635752 1889 ntBASIC19.45■□□□□ 0.7
UPF3BQ9BZI7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
UPF3BQ9BZI7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPF3BQ9BZI7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPF3BQ9BZI7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UPF3BQ9BZI7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms