Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 AL391825.1-201ENST00000457671 1364 ntBASIC16.92■□□□□ 0.3
LRRC3Q9BY71 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 AL136982.4-201ENST00000437689 1740 ntBASIC16.92■□□□□ 0.3
LRRC3Q9BY71 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRC3Q9BY71 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 AL589987.1-201ENST00000453380 819 ntBASIC16.91■□□□□ 0.3
LRRC3Q9BY71 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 AC093004.1-201ENST00000508850 424 ntBASIC16.91■□□□□ 0.3
LRRC3Q9BY71 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.91■□□□□ 0.3
LRRC3Q9BY71 AL109936.8-201ENST00000641772 604 ntBASIC16.91■□□□□ 0.3
LRRC3Q9BY71 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC3Q9BY71 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 SLC7A15P-201ENST00000424028 1363 ntBASIC16.9■□□□□ 0.3
LRRC3Q9BY71 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms