Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 AC090340.1-201ENST00000620778 4980 ntBASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 AC092127.1-201ENST00000567093 3455 ntBASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 AL590627.1-203ENST00000421194 1026 ntBASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 AC245100.5-201ENST00000452108 331 ntBASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 AC106730.1-201ENST00000566722 1090 ntBASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 AC061975.2-201ENST00000581722 295 ntBASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 AC140113.2-201ENST00000604370 208 ntBASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO3Q9BXY4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 AC090616.6-203ENST00000579186 1945 ntBASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 ADH5P3-201ENST00000433842 1137 ntBASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 AL365330.1-201ENST00000607459 531 ntBASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 BX640515.1-201ENST00000617215 977 ntBASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO3Q9BXY4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms