Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 MTCL1P1-201ENST00000446207 792 ntBASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 AL732292.2-201ENST00000609649 430 ntBASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 AL356585.2-201ENST00000625078 2396 ntBASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 RN7SL606P-201ENST00000472779 293 ntBASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 AL139385.1-201ENST00000611744 3272 ntBASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.69□□□□□ -0.38
NDUFAF3Q9BU61 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.68□□□□□ -0.38
NDUFAF3Q9BU61 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
NDUFAF3Q9BU61 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFAF3Q9BU61 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFAF3Q9BU61 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFAF3Q9BU61 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms