Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CMSS1Q9BQ75 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
CMSS1Q9BQ75 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CMSS1Q9BQ75 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CMSS1Q9BQ75 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CMSS1Q9BQ75 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.02□□□□□ -0.16
CMSS1Q9BQ75 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CMSS1Q9BQ75 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CMSS1Q9BQ75 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CMSS1Q9BQ75 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.02□□□□□ -0.16
CMSS1Q9BQ75 PI4KAP1-204ENST00000612579 1703 ntBASIC14.02□□□□□ -0.16
CMSS1Q9BQ75 FAM45BP-202ENST00000592932 1624 ntBASIC14.02□□□□□ -0.16
CMSS1Q9BQ75 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.02□□□□□ -0.16
CMSS1Q9BQ75 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CMSS1Q9BQ75 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 RBM17P3-201ENST00000417687 1192 ntBASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 AC139887.3-201ENST00000568585 713 ntBASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMSS1Q9BQ75 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 GPAA1P2-202ENST00000606848 1787 ntBASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 ATP5G2P1-201ENST00000433580 426 ntBASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 AC138035.3-201ENST00000622706 2791 ntBASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CMSS1Q9BQ75 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14□□□□□ -0.17
CMSS1Q9BQ75 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14□□□□□ -0.17
CMSS1Q9BQ75 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CMSS1Q9BQ75 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CMSS1Q9BQ75 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CMSS1Q9BQ75 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CMSS1Q9BQ75 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CMSS1Q9BQ75 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CMSS1Q9BQ75 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms