Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS4Q96RK4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS4Q96RK4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS4Q96RK4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS4Q96RK4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS4Q96RK4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS4Q96RK4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS4Q96RK4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 AC092474.2-201ENST00000424288 719 ntBASIC15.5■□□□□ 0.07
BBS4Q96RK4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BBS4Q96RK4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 AL078644.1-201ENST00000609881 752 ntBASIC15.5■□□□□ 0.07
BBS4Q96RK4 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS4Q96RK4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS4Q96RK4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BBS4Q96RK4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BBS4Q96RK4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS4Q96RK4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BBS4Q96RK4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS4Q96RK4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS4Q96RK4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS4Q96RK4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.5■□□□□ 0.07
BBS4Q96RK4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.49■□□□□ 0.07
BBS4Q96RK4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS4Q96RK4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
BBS4Q96RK4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
BBS4Q96RK4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS4Q96RK4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
BBS4Q96RK4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.49■□□□□ 0.07
BBS4Q96RK4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS4Q96RK4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.49■□□□□ 0.07
BBS4Q96RK4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.49■□□□□ 0.07
BBS4Q96RK4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.49■□□□□ 0.07
BBS4Q96RK4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS4Q96RK4 MIR940-201ENST00000401276 94 ntBASIC15.49■□□□□ 0.07
BBS4Q96RK4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
BBS4Q96RK4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.49■□□□□ 0.07
BBS4Q96RK4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.49■□□□□ 0.07
BBS4Q96RK4 AL513190.1-201ENST00000621254 727 ntBASIC15.49■□□□□ 0.07
BBS4Q96RK4 AL161645.1-201ENST00000622716 1255 ntBASIC15.49■□□□□ 0.07
BBS4Q96RK4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS4Q96RK4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
BBS4Q96RK4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS4Q96RK4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.49■□□□□ 0.07
BBS4Q96RK4 AC046158.3-201ENST00000624947 2558 ntBASIC15.49■□□□□ 0.07
BBS4Q96RK4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS4Q96RK4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
BBS4Q96RK4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
BBS4Q96RK4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.49■□□□□ 0.07
BBS4Q96RK4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS4Q96RK4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS4Q96RK4 LINC02199-201ENST00000506655 2702 ntBASIC15.49■□□□□ 0.07
BBS4Q96RK4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS4Q96RK4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.49■□□□□ 0.07
BBS4Q96RK4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS4Q96RK4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS4Q96RK4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.49■□□□□ 0.07
BBS4Q96RK4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.49■□□□□ 0.07
BBS4Q96RK4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
BBS4Q96RK4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BBS4Q96RK4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BBS4Q96RK4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
BBS4Q96RK4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
BBS4Q96RK4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
BBS4Q96RK4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
BBS4Q96RK4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.48■□□□□ 0.07
BBS4Q96RK4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
BBS4Q96RK4 AC016027.1-202ENST00000607927 1699 ntBASIC15.48■□□□□ 0.07
BBS4Q96RK4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.48■□□□□ 0.07
BBS4Q96RK4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BBS4Q96RK4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
BBS4Q96RK4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BBS4Q96RK4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BBS4Q96RK4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BBS4Q96RK4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BBS4Q96RK4 AC002056.1-201ENST00000395613 760 ntBASIC15.48■□□□□ 0.07
BBS4Q96RK4 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.48■□□□□ 0.07
BBS4Q96RK4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.48■□□□□ 0.07
BBS4Q96RK4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.48■□□□□ 0.07
BBS4Q96RK4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.48■□□□□ 0.07
BBS4Q96RK4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms