Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SNX27Q96L92 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
SNX27Q96L92 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
SNX27Q96L92 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SNX27Q96L92 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNX27Q96L92 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SNX27Q96L92 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNX27Q96L92 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.52■□□□□ 0.39
SNX27Q96L92 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.51■□□□□ 0.39
SNX27Q96L92 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX27Q96L92 AC087499.5-201ENST00000452760 1342 ntBASIC17.51■□□□□ 0.39
SNX27Q96L92 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX27Q96L92 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SNX27Q96L92 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX27Q96L92 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
SNX27Q96L92 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNX27Q96L92 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
SNX27Q96L92 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SNX27Q96L92 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNX27Q96L92 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX27Q96L92 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNX27Q96L92 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX27Q96L92 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SNX27Q96L92 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX27Q96L92 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.51■□□□□ 0.39
SNX27Q96L92 AC245100.5-201ENST00000452108 331 ntBASIC17.51■□□□□ 0.39
SNX27Q96L92 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX27Q96L92 AC009477.1-201ENST00000452936 217 ntBASIC17.51■□□□□ 0.39
SNX27Q96L92 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX27Q96L92 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.51■□□□□ 0.39
SNX27Q96L92 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SNX27Q96L92 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.51■□□□□ 0.39
SNX27Q96L92 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.51■□□□□ 0.39
SNX27Q96L92 AC046158.3-201ENST00000624947 2558 ntBASIC17.51■□□□□ 0.39
SNX27Q96L92 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.51■□□□□ 0.39
SNX27Q96L92 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.51■□□□□ 0.39
SNX27Q96L92 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX27Q96L92 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.51■□□□□ 0.39
SNX27Q96L92 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX27Q96L92 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX27Q96L92 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SNX27Q96L92 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SNX27Q96L92 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.51■□□□□ 0.39
SNX27Q96L92 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.51■□□□□ 0.39
SNX27Q96L92 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX27Q96L92 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.51■□□□□ 0.39
SNX27Q96L92 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX27Q96L92 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.5■□□□□ 0.39
SNX27Q96L92 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.5■□□□□ 0.39
SNX27Q96L92 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX27Q96L92 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX27Q96L92 AL136982.4-201ENST00000437689 1740 ntBASIC17.5■□□□□ 0.39
SNX27Q96L92 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX27Q96L92 AC022144.1-201ENST00000602255 1580 ntBASIC17.5■□□□□ 0.39
SNX27Q96L92 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SNX27Q96L92 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX27Q96L92 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
SNX27Q96L92 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX27Q96L92 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
SNX27Q96L92 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX27Q96L92 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SNX27Q96L92 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.5■□□□□ 0.39
SNX27Q96L92 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX27Q96L92 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.5■□□□□ 0.39
SNX27Q96L92 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX27Q96L92 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.5■□□□□ 0.39
SNX27Q96L92 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.5■□□□□ 0.39
SNX27Q96L92 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.5■□□□□ 0.39
SNX27Q96L92 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.5■□□□□ 0.39
SNX27Q96L92 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SNX27Q96L92 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SNX27Q96L92 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.5■□□□□ 0.39
SNX27Q96L92 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX27Q96L92 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX27Q96L92 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX27Q96L92 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX27Q96L92 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.5■□□□□ 0.39
SNX27Q96L92 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SNX27Q96L92 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX27Q96L92 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.5■□□□□ 0.39
SNX27Q96L92 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SNX27Q96L92 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX27Q96L92 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.5■□□□□ 0.39
SNX27Q96L92 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX27Q96L92 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SNX27Q96L92 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNX27Q96L92 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.49■□□□□ 0.39
SNX27Q96L92 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SNX27Q96L92 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNX27Q96L92 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.49■□□□□ 0.39
SNX27Q96L92 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNX27Q96L92 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.49■□□□□ 0.39
SNX27Q96L92 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.49■□□□□ 0.39
SNX27Q96L92 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNX27Q96L92 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNX27Q96L92 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNX27Q96L92 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNX27Q96L92 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNX27Q96L92 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.49■□□□□ 0.39
SNX27Q96L92 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms