Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.07■□□□□ 0.64
SMARCC2Q8TAQ2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMARCC2Q8TAQ2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMARCC2Q8TAQ2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMARCC2Q8TAQ2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SMARCC2Q8TAQ2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMARCC2Q8TAQ2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.07■□□□□ 0.64
SMARCC2Q8TAQ2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMARCC2Q8TAQ2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.07■□□□□ 0.64
SMARCC2Q8TAQ2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 KRT18P28-201ENST00000453838 1332 ntBASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 AC005237.2-201ENST00000434368 219 ntBASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 AC027612.4-201ENST00000605371 583 ntBASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 AC132872.4-202ENST00000622924 2756 ntBASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 AL139384.1-201ENST00000612143 3047 ntBASIC19.06■□□□□ 0.64
SMARCC2Q8TAQ2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 METTL21AP1-201ENST00000438852 635 ntBASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 KRT18P34-201ENST00000488218 1270 ntBASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 AC073439.1-201ENST00000624121 1774 ntBASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SMARCC2Q8TAQ2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 AP005117.1-202ENST00000581724 1908 ntBASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms