Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PACS2Q86VP3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
PACS2Q86VP3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PACS2Q86VP3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.5■□□□□ 0.23
PACS2Q86VP3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PACS2Q86VP3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PACS2Q86VP3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PACS2Q86VP3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PACS2Q86VP3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PACS2Q86VP3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PACS2Q86VP3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PACS2Q86VP3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PACS2Q86VP3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PACS2Q86VP3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PACS2Q86VP3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PACS2Q86VP3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PACS2Q86VP3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 KRT18P65-201ENST00000439811 1286 ntBASIC16.49■□□□□ 0.23
PACS2Q86VP3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PACS2Q86VP3 TOB2P1-201ENST00000469761 992 ntBASIC16.49■□□□□ 0.23
PACS2Q86VP3 RN7SL606P-201ENST00000472779 293 ntBASIC16.49■□□□□ 0.23
PACS2Q86VP3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 AP000867.3-201ENST00000524675 377 ntBASIC16.49■□□□□ 0.23
PACS2Q86VP3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PACS2Q86VP3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PACS2Q86VP3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PACS2Q86VP3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PACS2Q86VP3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PACS2Q86VP3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PACS2Q86VP3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.48■□□□□ 0.23
PACS2Q86VP3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC16.48■□□□□ 0.23
PACS2Q86VP3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.48■□□□□ 0.23
PACS2Q86VP3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PACS2Q86VP3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.48■□□□□ 0.23
PACS2Q86VP3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 AC112504.1-201ENST00000623415 1841 ntBASIC16.48■□□□□ 0.23
PACS2Q86VP3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.48■□□□□ 0.23
PACS2Q86VP3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.48■□□□□ 0.23
PACS2Q86VP3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.48■□□□□ 0.23
PACS2Q86VP3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PACS2Q86VP3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
PACS2Q86VP3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.48■□□□□ 0.23
PACS2Q86VP3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.48■□□□□ 0.23
PACS2Q86VP3 TMEM14EP-202ENST00000639378 1296 ntBASIC16.48■□□□□ 0.23
PACS2Q86VP3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC16.48■□□□□ 0.23
PACS2Q86VP3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PACS2Q86VP3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.48■□□□□ 0.23
PACS2Q86VP3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.48■□□□□ 0.23
PACS2Q86VP3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
PACS2Q86VP3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PACS2Q86VP3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.47■□□□□ 0.23
PACS2Q86VP3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.47■□□□□ 0.23
PACS2Q86VP3 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC16.47■□□□□ 0.23
PACS2Q86VP3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms