Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AL513480.1-201ENST00000451731 511 ntBASIC16.7■□□□□ 0.26
CASC4Q6P4E1 CXCL1P1-201ENST00000502804 216 ntBASIC16.7■□□□□ 0.26
CASC4Q6P4E1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 AP003680.1-201ENST00000598970 3660 ntBASIC16.69■□□□□ 0.26
CASC4Q6P4E1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 AL031008.1-201ENST00000619963 541 ntBASIC16.69■□□□□ 0.26
CASC4Q6P4E1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 AC005622.1-201ENST00000636801 1703 ntBASIC16.69■□□□□ 0.26
CASC4Q6P4E1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 AC105917.1-201ENST00000506637 2539 ntBASIC16.69■□□□□ 0.26
CASC4Q6P4E1 AL365209.1-201ENST00000624418 6473 ntBASIC16.69■□□□□ 0.26
CASC4Q6P4E1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CASC4Q6P4E1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 AL031284.1-201ENST00000419297 478 ntBASIC16.68■□□□□ 0.26
CASC4Q6P4E1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 PRSS29P-201ENST00000440800 595 ntBASIC16.68■□□□□ 0.26
CASC4Q6P4E1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 AL049840.3-201ENST00000602669 611 ntBASIC16.68■□□□□ 0.26
CASC4Q6P4E1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms