Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 ELL2P1-201ENST00000413990 1906 ntBASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 RPSAP43-201ENST00000402237 625 ntBASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 YBX1P5-201ENST00000509441 847 ntBASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 AC023511.2-201ENST00000618803 211 ntBASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 AC079781.4-201ENST00000641908 219 ntBASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL1Q6NVV3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NIPAL1Q6NVV3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.77■□□□□ 0.11
NIPAL1Q6NVV3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.77■□□□□ 0.11
NIPAL1Q6NVV3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
NIPAL1Q6NVV3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NIPAL1Q6NVV3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NIPAL1Q6NVV3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NIPAL1Q6NVV3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
NIPAL1Q6NVV3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
NIPAL1Q6NVV3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
NIPAL1Q6NVV3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NIPAL1Q6NVV3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 SNX33P1-201ENST00000592116 1762 ntBASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL1Q6NVV3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms