Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 TSEN15P1-201ENST00000423257 515 ntBASIC17■□□□□ 0.31
TTC39BQ5VTQ0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 AC093520.2-201ENST00000561830 333 ntBASIC17■□□□□ 0.31
TTC39BQ5VTQ0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 GGT4P-201ENST00000623672 1708 ntBASIC17■□□□□ 0.31
TTC39BQ5VTQ0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
TTC39BQ5VTQ0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 KRT18P28-201ENST00000453838 1332 ntBASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 MIR346-201ENST00000362234 95 ntBASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TTC39BQ5VTQ0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms