Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 AC092865.6-201ENST00000642101 219 ntBASIC16.9■□□□□ 0.3
LRRC38Q5VT99 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.89■□□□□ 0.3
LRRC38Q5VT99 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.3
LRRC38Q5VT99 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LRRC38Q5VT99 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.89■□□□□ 0.3
LRRC38Q5VT99 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
LRRC38Q5VT99 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
LRRC38Q5VT99 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LRRC38Q5VT99 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 KRT18P3-201ENST00000451602 1288 ntBASIC16.89■□□□□ 0.29
LRRC38Q5VT99 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 AC105233.2-201ENST00000523697 349 ntBASIC16.89■□□□□ 0.29
LRRC38Q5VT99 SLC25A1P1-201ENST00000528351 927 ntBASIC16.89■□□□□ 0.29
LRRC38Q5VT99 AF228730.5-201ENST00000530288 346 ntBASIC16.89■□□□□ 0.29
LRRC38Q5VT99 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 AC140113.2-201ENST00000604370 208 ntBASIC16.89■□□□□ 0.29
LRRC38Q5VT99 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 AC022532.1-201ENST00000624563 1728 ntBASIC16.89■□□□□ 0.29
LRRC38Q5VT99 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 AC092384.3-202ENST00000564646 2873 ntBASIC16.89■□□□□ 0.29
LRRC38Q5VT99 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC38Q5VT99 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 MED15P5-201ENST00000423150 992 ntBASIC16.88■□□□□ 0.29
LRRC38Q5VT99 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 AL138918.1-201ENST00000568306 659 ntBASIC16.88■□□□□ 0.29
LRRC38Q5VT99 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 AC104640.1-201ENST00000562617 2109 ntBASIC16.88■□□□□ 0.29
LRRC38Q5VT99 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.88■□□□□ 0.29
LRRC38Q5VT99 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC38Q5VT99 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.87■□□□□ 0.29
LRRC38Q5VT99 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms