Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.91■□□□□ 0.3
RAB6CQ53S08 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 PRAL-201ENST00000624952 3286 ntBASIC16.91■□□□□ 0.3
RAB6CQ53S08 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 AL139400.1-201ENST00000366220 510 ntBASIC16.91■□□□□ 0.3
RAB6CQ53S08 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 MIR1233-2-201ENST00000408138 82 ntBASIC16.91■□□□□ 0.3
RAB6CQ53S08 MIR1233-1-201ENST00000408722 82 ntBASIC16.91■□□□□ 0.3
RAB6CQ53S08 KRT18P32-201ENST00000424695 1287 ntBASIC16.91■□□□□ 0.3
RAB6CQ53S08 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 AP006288.1-201ENST00000446065 395 ntBASIC16.91■□□□□ 0.3
RAB6CQ53S08 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 AP000344.2-201ENST00000512987 629 ntBASIC16.91■□□□□ 0.3
RAB6CQ53S08 RNA5SP410-201ENST00000516285 106 ntBASIC16.91■□□□□ 0.3
RAB6CQ53S08 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB6CQ53S08 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB6CQ53S08 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB6CQ53S08 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.9■□□□□ 0.3
RAB6CQ53S08 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB6CQ53S08 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB6CQ53S08 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.9■□□□□ 0.3
RAB6CQ53S08 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RAB6CQ53S08 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB6CQ53S08 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB6CQ53S08 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB6CQ53S08 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB6CQ53S08 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB6CQ53S08 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.9■□□□□ 0.3
RAB6CQ53S08 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB6CQ53S08 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB6CQ53S08 CNN2P11-201ENST00000429351 262 ntBASIC16.9■□□□□ 0.3
RAB6CQ53S08 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB6CQ53S08 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.9■□□□□ 0.3
RAB6CQ53S08 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
RAB6CQ53S08 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RAB6CQ53S08 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.9■□□□□ 0.3
RAB6CQ53S08 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
RAB6CQ53S08 AC139530.3-201ENST00000620344 690 ntBASIC16.9■□□□□ 0.3
RAB6CQ53S08 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.9■□□□□ 0.3
RAB6CQ53S08 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB6CQ53S08 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RAB6CQ53S08 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB6CQ53S08 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB6CQ53S08 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.9■□□□□ 0.3
RAB6CQ53S08 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB6CQ53S08 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB6CQ53S08 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RAB6CQ53S08 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB6CQ53S08 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RAB6CQ53S08 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB6CQ53S08 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RAB6CQ53S08 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.89■□□□□ 0.3
RAB6CQ53S08 AC134407.2-201ENST00000625089 1978 ntBASIC16.89■□□□□ 0.3
RAB6CQ53S08 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB6CQ53S08 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB6CQ53S08 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB6CQ53S08 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB6CQ53S08 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.89■□□□□ 0.29
RAB6CQ53S08 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB6CQ53S08 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB6CQ53S08 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB6CQ53S08 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB6CQ53S08 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms