Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 AL645728.1-201ENST00000366221 2101 ntBASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 AL020989.1-201ENST00000422979 469 ntBASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 AC025678.2-201ENST00000562061 970 ntBASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 PDPK2P-202ENST00000562415 1191 ntBASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 AL031432.2-201ENST00000566714 459 ntBASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 AL928711.1-201ENST00000570165 459 ntBASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 AC004835.2-201ENST00000603762 682 ntBASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 AC008667.4-201ENST00000607370 168 ntBASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 AD001527.2-201ENST00000622994 785 ntBASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CHRFAM7AQ494W8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 NCF1C-201ENST00000438382 1427 ntBASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 RPS15P9-201ENST00000494093 319 ntBASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 IGHV3-65-201ENST00000523210 341 ntBASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms