Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 AC012313.1-201ENST00000593393 3059 ntBASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 MIR3619-201ENST00000579667 83 ntBASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 MIR4750-201ENST00000584564 56 ntBASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 AC134312.5-201ENST00000568031 1313 ntBASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO4Q2I0M5 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 LTB4R2-202ENST00000528054 3092 ntBASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 AL139010.1-201ENST00000454878 894 ntBASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 AC009486.1-201ENST00000569860 813 ntBASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 AL049840.4-201ENST00000602422 811 ntBASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 AC079416.2-201ENST00000625035 1193 ntBASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
RSPO4Q2I0M5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.1
RSPO4Q2I0M5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
RSPO4Q2I0M5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
RSPO4Q2I0M5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
RSPO4Q2I0M5 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms