Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 AC098614.1-201ENST00000368528 745 ntBASIC19.35■□□□□ 0.69
PDS5AQ29RF7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 AC074338.1-201ENST00000416825 156 ntBASIC19.35■□□□□ 0.69
PDS5AQ29RF7 AC136604.1-201ENST00000418535 575 ntBASIC19.35■□□□□ 0.69
PDS5AQ29RF7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 MEIS3P1-201ENST00000495167 958 ntBASIC19.35■□□□□ 0.69
PDS5AQ29RF7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 CHCHD2P3-201ENST00000603038 451 ntBASIC19.35■□□□□ 0.69
PDS5AQ29RF7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.35■□□□□ 0.69
PDS5AQ29RF7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 MTHFR-217ENST00000641820 1569 ntBASIC19.34■□□□□ 0.69
PDS5AQ29RF7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 NKILA-202ENST00000614771 2598 ntBASIC19.34■□□□□ 0.69
PDS5AQ29RF7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDS5AQ29RF7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDS5AQ29RF7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDS5AQ29RF7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDS5AQ29RF7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDS5AQ29RF7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PDS5AQ29RF7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDS5AQ29RF7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PDS5AQ29RF7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.33■□□□□ 0.69
PDS5AQ29RF7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
PDS5AQ29RF7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.33■□□□□ 0.69
PDS5AQ29RF7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.33■□□□□ 0.69
PDS5AQ29RF7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.33■□□□□ 0.69
PDS5AQ29RF7 RARRES2P5-201ENST00000564013 466 ntBASIC19.33■□□□□ 0.69
PDS5AQ29RF7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.33■□□□□ 0.69
PDS5AQ29RF7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDS5AQ29RF7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.33■□□□□ 0.69
PDS5AQ29RF7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PDS5AQ29RF7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDS5AQ29RF7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.33■□□□□ 0.68
PDS5AQ29RF7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDS5AQ29RF7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDS5AQ29RF7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDS5AQ29RF7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.33■□□□□ 0.68
PDS5AQ29RF7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PDS5AQ29RF7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
PDS5AQ29RF7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PDS5AQ29RF7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDS5AQ29RF7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms