Protein–RNA interactions for Protein: P98155

VLDLR, Very low-density lipoprotein receptor, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLRP98155 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.29■□□□□ 0.04
VLDLRP98155 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
VLDLRP98155 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VLDLRP98155 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VLDLRP98155 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.29■□□□□ 0.04
VLDLRP98155 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VLDLRP98155 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
VLDLRP98155 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VLDLRP98155 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.29■□□□□ 0.04
VLDLRP98155 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VLDLRP98155 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VLDLRP98155 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VLDLRP98155 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VLDLRP98155 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VLDLRP98155 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.29■□□□□ 0.04
VLDLRP98155 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VLDLRP98155 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VLDLRP98155 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VLDLRP98155 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VLDLRP98155 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
VLDLRP98155 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.28■□□□□ 0.04
VLDLRP98155 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VLDLRP98155 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VLDLRP98155 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
VLDLRP98155 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VLDLRP98155 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.28■□□□□ 0.04
VLDLRP98155 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.28■□□□□ 0.04
VLDLRP98155 AP003680.1-201ENST00000598970 3660 ntBASIC15.28■□□□□ 0.04
VLDLRP98155 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.28■□□□□ 0.04
VLDLRP98155 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.28■□□□□ 0.04
VLDLRP98155 HLA-A-201ENST00000376802 1334 ntBASIC15.28■□□□□ 0.04
VLDLRP98155 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VLDLRP98155 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VLDLRP98155 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VLDLRP98155 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VLDLRP98155 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.28■□□□□ 0.04
VLDLRP98155 MRPL3P1-201ENST00000400109 1033 ntBASIC15.28■□□□□ 0.04
VLDLRP98155 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VLDLRP98155 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.28■□□□□ 0.04
VLDLRP98155 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.28■□□□□ 0.04
VLDLRP98155 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.28■□□□□ 0.04
VLDLRP98155 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.28■□□□□ 0.04
VLDLRP98155 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.28■□□□□ 0.04
VLDLRP98155 AC020765.3-201ENST00000613051 740 ntBASIC15.28■□□□□ 0.04
VLDLRP98155 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.28■□□□□ 0.04
VLDLRP98155 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.28■□□□□ 0.04
VLDLRP98155 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.28■□□□□ 0.04
VLDLRP98155 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VLDLRP98155 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VLDLRP98155 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VLDLRP98155 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.28■□□□□ 0.04
VLDLRP98155 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VLDLRP98155 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VLDLRP98155 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.27■□□□□ 0.04
VLDLRP98155 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VLDLRP98155 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VLDLRP98155 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VLDLRP98155 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.27■□□□□ 0.04
VLDLRP98155 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VLDLRP98155 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VLDLRP98155 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VLDLRP98155 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VLDLRP98155 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.27■□□□□ 0.04
VLDLRP98155 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VLDLRP98155 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.27■□□□□ 0.04
VLDLRP98155 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VLDLRP98155 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VLDLRP98155 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VLDLRP98155 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VLDLRP98155 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
VLDLRP98155 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VLDLRP98155 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VLDLRP98155 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.27■□□□□ 0.04
VLDLRP98155 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.27■□□□□ 0.04
VLDLRP98155 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.27■□□□□ 0.04
VLDLRP98155 ELK2BP-201ENST00000415014 1224 ntBASIC15.27■□□□□ 0.04
VLDLRP98155 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.27■□□□□ 0.04
VLDLRP98155 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.27■□□□□ 0.04
VLDLRP98155 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.27■□□□□ 0.04
VLDLRP98155 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.27■□□□□ 0.04
VLDLRP98155 SART3-203ENST00000546611 1184 ntBASIC15.27■□□□□ 0.04
VLDLRP98155 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
VLDLRP98155 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.27■□□□□ 0.04
VLDLRP98155 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VLDLRP98155 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.27■□□□□ 0.04
VLDLRP98155 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.27■□□□□ 0.04
VLDLRP98155 MTDHP3-201ENST00000594186 672 ntBASIC15.27■□□□□ 0.04
VLDLRP98155 MTDHP4-201ENST00000600287 670 ntBASIC15.27■□□□□ 0.04
VLDLRP98155 AC120114.3-201ENST00000611923 658 ntBASIC15.27■□□□□ 0.04
VLDLRP98155 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VLDLRP98155 REXO1L6P-202ENST00000619970 1078 ntBASIC15.27■□□□□ 0.04
VLDLRP98155 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.27■□□□□ 0.03
VLDLRP98155 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
VLDLRP98155 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.27■□□□□ 0.03
VLDLRP98155 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
VLDLRP98155 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.27■□□□□ 0.03
VLDLRP98155 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
VLDLRP98155 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VLDLRP98155 AC006504.4-201ENST00000592118 1568 ntBASIC15.27■□□□□ 0.03
VLDLRP98155 TNRC18P2-201ENST00000417666 2714 ntBASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms