Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.22□□□□□ -0.13
ATP1B3P54709 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 AC099063.4-201ENST00000641099 1602 ntBASIC14.22□□□□□ -0.13
ATP1B3P54709 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.22□□□□□ -0.13
ATP1B3P54709 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ATP1B3P54709 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.22□□□□□ -0.13
ATP1B3P54709 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 AL596087.1-201ENST00000400979 1969 ntBASIC14.22□□□□□ -0.13
ATP1B3P54709 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ATP1B3P54709 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
ATP1B3P54709 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.21□□□□□ -0.13
ATP1B3P54709 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.21□□□□□ -0.13
ATP1B3P54709 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATP1B3P54709 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATP1B3P54709 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATP1B3P54709 AC012569.1-201ENST00000591191 1524 ntBASIC14.21□□□□□ -0.13
ATP1B3P54709 AC006449.6-201ENST00000612330 2296 ntBASIC14.21□□□□□ -0.13
ATP1B3P54709 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.21□□□□□ -0.13
ATP1B3P54709 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATP1B3P54709 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATP1B3P54709 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATP1B3P54709 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATP1B3P54709 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.21□□□□□ -0.13
ATP1B3P54709 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATP1B3P54709 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATP1B3P54709 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.21□□□□□ -0.13
ATP1B3P54709 DUSP5P1-201ENST00000441325 1139 ntBASIC14.21□□□□□ -0.13
ATP1B3P54709 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.21□□□□□ -0.13
ATP1B3P54709 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.21□□□□□ -0.13
ATP1B3P54709 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.21□□□□□ -0.13
ATP1B3P54709 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.21□□□□□ -0.13
ATP1B3P54709 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ATP1B3P54709 AL121912.1-201ENST00000603683 238 ntBASIC14.21□□□□□ -0.13
ATP1B3P54709 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.21□□□□□ -0.13
ATP1B3P54709 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATP1B3P54709 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATP1B3P54709 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATP1B3P54709 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATP1B3P54709 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.21□□□□□ -0.13
ATP1B3P54709 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ATP1B3P54709 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ATP1B3P54709 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.21□□□□□ -0.14
ATP1B3P54709 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.21□□□□□ -0.14
ATP1B3P54709 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.21□□□□□ -0.14
ATP1B3P54709 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATP1B3P54709 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.21□□□□□ -0.14
ATP1B3P54709 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATP1B3P54709 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATP1B3P54709 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.21□□□□□ -0.14
ATP1B3P54709 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ATP1B3P54709 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATP1B3P54709 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATP1B3P54709 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.2□□□□□ -0.14
ATP1B3P54709 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.2□□□□□ -0.14
ATP1B3P54709 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.2□□□□□ -0.14
ATP1B3P54709 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ATP1B3P54709 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ATP1B3P54709 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.2□□□□□ -0.14
ATP1B3P54709 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.2□□□□□ -0.14
ATP1B3P54709 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.2□□□□□ -0.14
ATP1B3P54709 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 KRT18P67-201ENST00000432816 1264 ntBASIC14.2□□□□□ -0.14
ATP1B3P54709 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.2□□□□□ -0.14
ATP1B3P54709 EMBP1-201ENST00000458200 901 ntBASIC14.2□□□□□ -0.14
ATP1B3P54709 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ATP1B3P54709 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.2□□□□□ -0.14
ATP1B3P54709 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.2□□□□□ -0.14
ATP1B3P54709 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
ATP1B3P54709 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
ATP1B3P54709 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.2□□□□□ -0.14
ATP1B3P54709 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ATP1B3P54709 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
ATP1B3P54709 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.2□□□□□ -0.14
ATP1B3P54709 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
ATP1B3P54709 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.2□□□□□ -0.14
ATP1B3P54709 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms