Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.49□□□□□ -0.25
SNCAP37840 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.49□□□□□ -0.25
SNCAP37840 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.49□□□□□ -0.25
SNCAP37840 NUS1P1-201ENST00000446295 882 ntBASIC13.49□□□□□ -0.25
SNCAP37840 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 AP000867.3-201ENST00000524675 377 ntBASIC13.49□□□□□ -0.25
SNCAP37840 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
SNCAP37840 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.49□□□□□ -0.25
SNCAP37840 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
SNCAP37840 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.49□□□□□ -0.25
SNCAP37840 AP000867.4-201ENST00000641616 219 ntBASIC13.49□□□□□ -0.25
SNCAP37840 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.49□□□□□ -0.25
SNCAP37840 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
SNCAP37840 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SNCAP37840 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.49□□□□□ -0.25
SNCAP37840 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
SNCAP37840 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SNCAP37840 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SNCAP37840 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
SNCAP37840 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.49□□□□□ -0.25
SNCAP37840 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SNCAP37840 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SNCAP37840 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SNCAP37840 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
SNCAP37840 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.48□□□□□ -0.25
SNCAP37840 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.48□□□□□ -0.25
SNCAP37840 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
SNCAP37840 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
SNCAP37840 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SNCAP37840 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.48□□□□□ -0.25
SNCAP37840 LINC00982-205ENST00000420957 435 ntBASIC13.48□□□□□ -0.25
SNCAP37840 IGHV3-47-201ENST00000425060 335 ntBASIC13.48□□□□□ -0.25
SNCAP37840 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 ABCD1P5-201ENST00000445663 754 ntBASIC13.48□□□□□ -0.25
SNCAP37840 HLA-J-202ENST00000469281 1241 ntBASIC13.48□□□□□ -0.25
SNCAP37840 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SNCAP37840 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.48□□□□□ -0.25
SNCAP37840 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.48□□□□□ -0.25
SNCAP37840 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 AC092329.2-201ENST00000598402 547 ntBASIC13.48□□□□□ -0.25
SNCAP37840 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SNCAP37840 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.48□□□□□ -0.25
SNCAP37840 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.48□□□□□ -0.25
SNCAP37840 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.48□□□□□ -0.25
SNCAP37840 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SNCAP37840 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
SNCAP37840 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNCAP37840 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 SIGLEC16-201ENST00000599858 1437 ntBASIC13.47□□□□□ -0.25
SNCAP37840 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
SNCAP37840 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.47□□□□□ -0.25
SNCAP37840 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
SNCAP37840 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SNCAP37840 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms