Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 AC009336.1-201ENST00000608941 1553 ntBASIC18.61■□□□□ 0.57
CLCN1P35523 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.61■□□□□ 0.57
CLCN1P35523 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLCN1P35523 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.61■□□□□ 0.57
CLCN1P35523 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.61■□□□□ 0.57
CLCN1P35523 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
CLCN1P35523 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.61■□□□□ 0.57
CLCN1P35523 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CLCN1P35523 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.61■□□□□ 0.57
CLCN1P35523 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.61■□□□□ 0.57
CLCN1P35523 AC099336.1-202ENST00000602961 463 ntBASIC18.61■□□□□ 0.57
CLCN1P35523 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.61■□□□□ 0.57
CLCN1P35523 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.61■□□□□ 0.57
CLCN1P35523 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CLCN1P35523 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLCN1P35523 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.61■□□□□ 0.57
CLCN1P35523 C1R-201ENST00000535233 2211 ntTSL 2 BASIC18.61■□□□□ 0.57
CLCN1P35523 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.6■□□□□ 0.57
CLCN1P35523 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CLCN1P35523 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.6■□□□□ 0.57
CLCN1P35523 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.6■□□□□ 0.57
CLCN1P35523 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.6■□□□□ 0.57
CLCN1P35523 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC18.6■□□□□ 0.57
CLCN1P35523 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 AC002310.6-201ENST00000624451 1377 ntBASIC18.6■□□□□ 0.57
CLCN1P35523 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.6■□□□□ 0.57
CLCN1P35523 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CLCN1P35523 UPK3BP1-201ENST00000428678 509 ntBASIC18.6■□□□□ 0.57
CLCN1P35523 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 STK19B-204ENST00000512515 211 ntBASIC18.6■□□□□ 0.57
CLCN1P35523 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.6■□□□□ 0.57
CLCN1P35523 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.6■□□□□ 0.57
CLCN1P35523 MIR5100-201ENST00000579544 119 ntBASIC18.6■□□□□ 0.57
CLCN1P35523 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.6■□□□□ 0.57
CLCN1P35523 AC073592.5-201ENST00000624854 528 ntBASIC18.6■□□□□ 0.57
CLCN1P35523 REXO1L2P-201ENST00000425429 2069 ntBASIC18.6■□□□□ 0.57
CLCN1P35523 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLCN1P35523 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.6■□□□□ 0.57
CLCN1P35523 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLCN1P35523 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
CLCN1P35523 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC18.6■□□□□ 0.57
CLCN1P35523 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN1P35523 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.6■□□□□ 0.57
CLCN1P35523 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN1P35523 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN1P35523 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN1P35523 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN1P35523 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN1P35523 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN1P35523 AC117489.1-201ENST00000625169 3217 ntBASIC18.59■□□□□ 0.57
CLCN1P35523 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN1P35523 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN1P35523 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN1P35523 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CLCN1P35523 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.59■□□□□ 0.57
CLCN1P35523 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN1P35523 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN1P35523 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CLCN1P35523 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.59■□□□□ 0.57
CLCN1P35523 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN1P35523 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.59■□□□□ 0.57
CLCN1P35523 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCN1P35523 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN1P35523 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.59■□□□□ 0.57
CLCN1P35523 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.59■□□□□ 0.57
CLCN1P35523 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.59■□□□□ 0.57
CLCN1P35523 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms