Protein–RNA interactions for Protein: P33897

ABCD1, ATP-binding cassette sub-family D member 1, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P33897 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ABCD1P33897 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ABCD1P33897 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ABCD1P33897 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
ABCD1P33897 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ABCD1P33897 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.79■□□□□ 0.44
ABCD1P33897 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ABCD1P33897 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ABCD1P33897 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ABCD1P33897 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ABCD1P33897 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ABCD1P33897 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ABCD1P33897 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ABCD1P33897 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ABCD1P33897 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ABCD1P33897 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.79■□□□□ 0.44
ABCD1P33897 C8orf49-201ENST00000525043 1968 ntBASIC17.79■□□□□ 0.44
ABCD1P33897 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ABCD1P33897 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ABCD1P33897 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ABCD1P33897 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ABCD1P33897 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ABCD1P33897 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ABCD1P33897 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ABCD1P33897 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ABCD1P33897 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.78■□□□□ 0.44
ABCD1P33897 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ABCD1P33897 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ABCD1P33897 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ABCD1P33897 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ABCD1P33897 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ABCD1P33897 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ABCD1P33897 AC004987.2-201ENST00000395959 1148 ntBASIC17.78■□□□□ 0.44
ABCD1P33897 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ABCD1P33897 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.78■□□□□ 0.44
ABCD1P33897 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.78■□□□□ 0.44
ABCD1P33897 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ABCD1P33897 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.78■□□□□ 0.44
ABCD1P33897 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.78■□□□□ 0.44
ABCD1P33897 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.78■□□□□ 0.44
ABCD1P33897 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.78■□□□□ 0.44
ABCD1P33897 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ABCD1P33897 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.78■□□□□ 0.44
ABCD1P33897 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
ABCD1P33897 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.78■□□□□ 0.44
ABCD1P33897 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.78■□□□□ 0.44
ABCD1P33897 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ABCD1P33897 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ABCD1P33897 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ABCD1P33897 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.78■□□□□ 0.44
ABCD1P33897 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ABCD1P33897 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.78■□□□□ 0.44
ABCD1P33897 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ABCD1P33897 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ABCD1P33897 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.77■□□□□ 0.44
ABCD1P33897 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ABCD1P33897 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ABCD1P33897 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
ABCD1P33897 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ABCD1P33897 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ABCD1P33897 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ABCD1P33897 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.77■□□□□ 0.44
ABCD1P33897 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.77■□□□□ 0.44
ABCD1P33897 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ABCD1P33897 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.77■□□□□ 0.44
ABCD1P33897 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ABCD1P33897 AL139400.1-201ENST00000366220 510 ntBASIC17.77■□□□□ 0.44
ABCD1P33897 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ABCD1P33897 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.77■□□□□ 0.44
ABCD1P33897 METTL21AP1-201ENST00000438852 635 ntBASIC17.77■□□□□ 0.44
ABCD1P33897 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.77■□□□□ 0.44
ABCD1P33897 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.77■□□□□ 0.44
ABCD1P33897 AC092183.1-201ENST00000469884 875 ntBASIC17.77■□□□□ 0.44
ABCD1P33897 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ABCD1P33897 AC109322.1-201ENST00000524499 1264 ntBASIC17.77■□□□□ 0.44
ABCD1P33897 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ABCD1P33897 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
ABCD1P33897 AC003101.2-201ENST00000612557 442 ntBASIC17.77■□□□□ 0.44
ABCD1P33897 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.77■□□□□ 0.44
ABCD1P33897 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.77■□□□□ 0.44
ABCD1P33897 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ABCD1P33897 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ABCD1P33897 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ABCD1P33897 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ABCD1P33897 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.77■□□□□ 0.43
ABCD1P33897 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.77■□□□□ 0.43
ABCD1P33897 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.77■□□□□ 0.43
ABCD1P33897 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ABCD1P33897 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ABCD1P33897 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.77■□□□□ 0.43
ABCD1P33897 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ABCD1P33897 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
ABCD1P33897 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.77■□□□□ 0.43
ABCD1P33897 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ABCD1P33897 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
ABCD1P33897 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ABCD1P33897 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ABCD1P33897 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ABCD1P33897 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ABCD1P33897 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms