Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMLP26374 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMLP26374 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMLP26374 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMLP26374 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMLP26374 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.61■□□□□ 0.73
CHMLP26374 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CHMLP26374 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMLP26374 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMLP26374 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMLP26374 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMLP26374 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMLP26374 MKNK2P1-201ENST00000437526 628 ntBASIC19.61■□□□□ 0.73
CHMLP26374 RN7SL589P-201ENST00000481268 310 ntBASIC19.61■□□□□ 0.73
CHMLP26374 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.61■□□□□ 0.73
CHMLP26374 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.61■□□□□ 0.73
CHMLP26374 AP000842.3-202ENST00000569238 1080 ntBASIC19.61■□□□□ 0.73
CHMLP26374 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.61■□□□□ 0.73
CHMLP26374 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CHMLP26374 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CHMLP26374 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMLP26374 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMLP26374 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMLP26374 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CHMLP26374 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CHMLP26374 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.61■□□□□ 0.73
CHMLP26374 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMLP26374 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMLP26374 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMLP26374 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMLP26374 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMLP26374 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMLP26374 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMLP26374 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.61■□□□□ 0.73
CHMLP26374 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.6■□□□□ 0.73
CHMLP26374 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CHMLP26374 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMLP26374 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CHMLP26374 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMLP26374 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMLP26374 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMLP26374 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMLP26374 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMLP26374 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMLP26374 SPDYE11-202ENST00000450699 704 ntBASIC19.6■□□□□ 0.73
CHMLP26374 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CHMLP26374 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMLP26374 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.6■□□□□ 0.73
CHMLP26374 SPDYE9P-201ENST00000570642 692 ntBASIC19.6■□□□□ 0.73
CHMLP26374 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.6■□□□□ 0.73
CHMLP26374 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMLP26374 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMLP26374 SPDYE10P-202ENST00000612005 668 ntBASIC19.6■□□□□ 0.73
CHMLP26374 SPDYE8P-202ENST00000612377 668 ntBASIC19.6■□□□□ 0.73
CHMLP26374 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMLP26374 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMLP26374 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CHMLP26374 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHMLP26374 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMLP26374 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMLP26374 PRAL-201ENST00000624952 3286 ntBASIC19.6■□□□□ 0.73
CHMLP26374 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMLP26374 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CHMLP26374 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMLP26374 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMLP26374 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMLP26374 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMLP26374 AL139384.1-201ENST00000612143 3047 ntBASIC19.6■□□□□ 0.73
CHMLP26374 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHMLP26374 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMLP26374 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CHMLP26374 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMLP26374 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMLP26374 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CHMLP26374 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CHMLP26374 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMLP26374 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMLP26374 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CHMLP26374 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHMLP26374 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMLP26374 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CHMLP26374 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMLP26374 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMLP26374 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHMLP26374 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMLP26374 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CHMLP26374 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMLP26374 ACTG1P14-201ENST00000446382 1122 ntBASIC19.59■□□□□ 0.73
CHMLP26374 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CHMLP26374 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMLP26374 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.59■□□□□ 0.73
CHMLP26374 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMLP26374 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHMLP26374 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CHMLP26374 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMLP26374 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CHMLP26374 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CHMLP26374 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMLP26374 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMLP26374 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms