Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 AL589702.1-201ENST00000641229 1509 ntBASIC17.12■□□□□ 0.33
PDGFRAP16234 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 LINC02199-201ENST00000506655 2702 ntBASIC17.12■□□□□ 0.33
PDGFRAP16234 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PDGFRAP16234 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.12■□□□□ 0.33
PDGFRAP16234 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PDGFRAP16234 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 KRT8P48-201ENST00000515599 1220 ntBASIC17.12■□□□□ 0.33
PDGFRAP16234 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PDGFRAP16234 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PDGFRAP16234 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.12■□□□□ 0.33
PDGFRAP16234 AC027307.2-201ENST00000591252 911 ntBASIC17.12■□□□□ 0.33
PDGFRAP16234 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.12■□□□□ 0.33
PDGFRAP16234 AC105339.1-204ENST00000636249 355 ntBASIC17.12■□□□□ 0.33
PDGFRAP16234 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.12■□□□□ 0.33
PDGFRAP16234 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.12■□□□□ 0.33
PDGFRAP16234 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PDGFRAP16234 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
PDGFRAP16234 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PDGFRAP16234 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PDGFRAP16234 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.11■□□□□ 0.33
PDGFRAP16234 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.11■□□□□ 0.33
PDGFRAP16234 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.11■□□□□ 0.33
PDGFRAP16234 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.11■□□□□ 0.33
PDGFRAP16234 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
PDGFRAP16234 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.11■□□□□ 0.33
PDGFRAP16234 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.11■□□□□ 0.33
PDGFRAP16234 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.11■□□□□ 0.33
PDGFRAP16234 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.11■□□□□ 0.33
PDGFRAP16234 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.11■□□□□ 0.33
PDGFRAP16234 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.11■□□□□ 0.33
PDGFRAP16234 AC073389.1-201ENST00000595595 795 ntBASIC17.11■□□□□ 0.33
PDGFRAP16234 AC022145.2-201ENST00000598203 171 ntBASIC17.11■□□□□ 0.33
PDGFRAP16234 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.11■□□□□ 0.33
PDGFRAP16234 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.11■□□□□ 0.33
PDGFRAP16234 AC008267.7-201ENST00000624570 1194 ntBASIC17.11■□□□□ 0.33
PDGFRAP16234 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.11■□□□□ 0.33
PDGFRAP16234 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.11■□□□□ 0.33
PDGFRAP16234 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 AC008741.2-201ENST00000612792 3115 ntBASIC17.11■□□□□ 0.33
PDGFRAP16234 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PDGFRAP16234 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFRAP16234 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDGFRAP16234 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.1■□□□□ 0.33
PDGFRAP16234 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDGFRAP16234 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDGFRAP16234 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDGFRAP16234 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.1■□□□□ 0.33
PDGFRAP16234 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.1■□□□□ 0.33
PDGFRAP16234 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDGFRAP16234 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDGFRAP16234 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.1■□□□□ 0.33
PDGFRAP16234 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDGFRAP16234 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.1■□□□□ 0.33
PDGFRAP16234 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PDGFRAP16234 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDGFRAP16234 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.1■□□□□ 0.33
PDGFRAP16234 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.1■□□□□ 0.33
PDGFRAP16234 AC004461.1-201ENST00000412461 403 ntBASIC17.1■□□□□ 0.33
PDGFRAP16234 AC079140.1-201ENST00000508039 487 ntBASIC17.1■□□□□ 0.33
PDGFRAP16234 AP000344.2-201ENST00000512987 629 ntBASIC17.1■□□□□ 0.33
PDGFRAP16234 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.1■□□□□ 0.33
PDGFRAP16234 AC105233.2-201ENST00000523697 349 ntBASIC17.1■□□□□ 0.33
PDGFRAP16234 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.1■□□□□ 0.33
PDGFRAP16234 AF228730.5-201ENST00000530288 346 ntBASIC17.1■□□□□ 0.33
PDGFRAP16234 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms