Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCG2P13521 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCG2P13521 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.71■□□□□ 0.59
SCG2P13521 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.71■□□□□ 0.59
SCG2P13521 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.71■□□□□ 0.59
SCG2P13521 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.71■□□□□ 0.59
SCG2P13521 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.71■□□□□ 0.59
SCG2P13521 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCG2P13521 AC106028.4-201ENST00000614509 607 ntBASIC18.71■□□□□ 0.59
SCG2P13521 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCG2P13521 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCG2P13521 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.71■□□□□ 0.59
SCG2P13521 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.71■□□□□ 0.59
SCG2P13521 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCG2P13521 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SCG2P13521 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SCG2P13521 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SCG2P13521 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.7■□□□□ 0.58
SCG2P13521 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SCG2P13521 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
SCG2P13521 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SCG2P13521 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SCG2P13521 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCG2P13521 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCG2P13521 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.7■□□□□ 0.58
SCG2P13521 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
SCG2P13521 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCG2P13521 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG2P13521 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG2P13521 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG2P13521 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.7■□□□□ 0.58
SCG2P13521 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCG2P13521 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.7■□□□□ 0.58
SCG2P13521 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.7■□□□□ 0.58
SCG2P13521 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.7■□□□□ 0.58
SCG2P13521 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.7■□□□□ 0.58
SCG2P13521 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG2P13521 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG2P13521 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG2P13521 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG2P13521 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SCG2P13521 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SCG2P13521 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCG2P13521 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCG2P13521 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCG2P13521 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCG2P13521 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCG2P13521 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCG2P13521 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SCG2P13521 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SCG2P13521 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCG2P13521 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
SCG2P13521 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCG2P13521 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCG2P13521 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.69■□□□□ 0.58
SCG2P13521 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.69■□□□□ 0.58
SCG2P13521 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SCG2P13521 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCG2P13521 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.69■□□□□ 0.58
SCG2P13521 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.69■□□□□ 0.58
SCG2P13521 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.69■□□□□ 0.58
SCG2P13521 MIR6080-201ENST00000617359 66 ntBASIC18.69■□□□□ 0.58
SCG2P13521 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.69■□□□□ 0.58
SCG2P13521 AC093028.1-201ENST00000622998 982 ntBASIC18.69■□□□□ 0.58
SCG2P13521 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCG2P13521 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCG2P13521 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCG2P13521 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.69■□□□□ 0.58
SCG2P13521 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SCG2P13521 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.69■□□□□ 0.58
SCG2P13521 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCG2P13521 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCG2P13521 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SCG2P13521 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCG2P13521 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG2P13521 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG2P13521 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCG2P13521 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SCG2P13521 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG2P13521 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.68■□□□□ 0.58
SCG2P13521 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG2P13521 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCG2P13521 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
SCG2P13521 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SCG2P13521 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG2P13521 HAUS4P1-201ENST00000406739 1145 ntBASIC18.68■□□□□ 0.58
SCG2P13521 SPDYE7P-202ENST00000420373 878 ntBASIC18.68■□□□□ 0.58
SCG2P13521 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.68■□□□□ 0.58
SCG2P13521 AC069262.1-201ENST00000539058 672 ntBASIC18.68■□□□□ 0.58
SCG2P13521 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.68■□□□□ 0.58
SCG2P13521 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG2P13521 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
SCG2P13521 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SCG2P13521 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG2P13521 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG2P13521 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG2P13521 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.68■□□□□ 0.58
SCG2P13521 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SCG2P13521 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG2P13521 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms