Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT3P12035 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
KRT3P12035 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT3P12035 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT3P12035 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT3P12035 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT3P12035 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.19■□□□□ 0.34
KRT3P12035 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT3P12035 AL355306.1-201ENST00000415580 579 ntBASIC17.19■□□□□ 0.34
KRT3P12035 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT3P12035 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
KRT3P12035 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT3P12035 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT3P12035 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.19■□□□□ 0.34
KRT3P12035 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT3P12035 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.19■□□□□ 0.34
KRT3P12035 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT3P12035 MTDHP5-201ENST00000598980 586 ntBASIC17.19■□□□□ 0.34
KRT3P12035 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.19■□□□□ 0.34
KRT3P12035 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT3P12035 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT3P12035 AC024909.3-201ENST00000611513 2257 ntBASIC17.19■□□□□ 0.34
KRT3P12035 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT3P12035 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT3P12035 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
KRT3P12035 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT3P12035 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
KRT3P12035 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT3P12035 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT3P12035 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT3P12035 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT3P12035 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT3P12035 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT3P12035 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
KRT3P12035 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT3P12035 AL603832.2-201ENST00000566195 2125 ntBASIC17.18■□□□□ 0.34
KRT3P12035 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT3P12035 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
KRT3P12035 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT3P12035 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT3P12035 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.18■□□□□ 0.34
KRT3P12035 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
KRT3P12035 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
KRT3P12035 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.18■□□□□ 0.34
KRT3P12035 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT3P12035 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
KRT3P12035 AL589702.1-201ENST00000641229 1509 ntBASIC17.18■□□□□ 0.34
KRT3P12035 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT3P12035 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT3P12035 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT3P12035 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT3P12035 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.18■□□□□ 0.34
KRT3P12035 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT3P12035 TFAMP1-201ENST00000412727 736 ntBASIC17.18■□□□□ 0.34
KRT3P12035 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.18■□□□□ 0.34
KRT3P12035 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT3P12035 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.18■□□□□ 0.34
KRT3P12035 FAM86C2P-203ENST00000528684 1004 ntBASIC17.18■□□□□ 0.34
KRT3P12035 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.18■□□□□ 0.34
KRT3P12035 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.18■□□□□ 0.34
KRT3P12035 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.18■□□□□ 0.34
KRT3P12035 AL138918.1-201ENST00000568306 659 ntBASIC17.18■□□□□ 0.34
KRT3P12035 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.18■□□□□ 0.34
KRT3P12035 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
KRT3P12035 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT3P12035 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT3P12035 C20orf181-201ENST00000623918 480 ntBASIC17.18■□□□□ 0.34
KRT3P12035 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT3P12035 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT3P12035 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT3P12035 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT3P12035 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT3P12035 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT3P12035 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT3P12035 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT3P12035 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.18■□□□□ 0.34
KRT3P12035 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
KRT3P12035 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.18■□□□□ 0.34
KRT3P12035 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT3P12035 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT3P12035 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
KRT3P12035 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT3P12035 AC008894.3-201ENST00000624324 3103 ntBASIC17.17■□□□□ 0.34
KRT3P12035 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.17■□□□□ 0.34
KRT3P12035 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.17■□□□□ 0.34
KRT3P12035 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT3P12035 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KRT3P12035 AC011270.2-201ENST00000624293 2550 ntBASIC17.17■□□□□ 0.34
KRT3P12035 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
KRT3P12035 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT3P12035 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT3P12035 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT3P12035 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT3P12035 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
KRT3P12035 YBX2P1-201ENST00000394192 760 ntBASIC17.17■□□□□ 0.34
KRT3P12035 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.17■□□□□ 0.34
KRT3P12035 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KRT3P12035 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.17■□□□□ 0.34
KRT3P12035 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
KRT3P12035 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms