Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RARAP10276 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RARAP10276 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RARAP10276 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RARAP10276 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.13■□□□□ 0.33
RARAP10276 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RARAP10276 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RARAP10276 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RARAP10276 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.13■□□□□ 0.33
RARAP10276 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RARAP10276 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RARAP10276 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.13■□□□□ 0.33
RARAP10276 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RARAP10276 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RARAP10276 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.13■□□□□ 0.33
RARAP10276 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RARAP10276 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RARAP10276 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RARAP10276 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RARAP10276 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RARAP10276 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RARAP10276 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RARAP10276 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RARAP10276 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RARAP10276 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RARAP10276 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.13■□□□□ 0.33
RARAP10276 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RARAP10276 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.13■□□□□ 0.33
RARAP10276 KRT18P3-201ENST00000451602 1288 ntBASIC17.13■□□□□ 0.33
RARAP10276 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.13■□□□□ 0.33
RARAP10276 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
RARAP10276 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.13■□□□□ 0.33
RARAP10276 AC027601.4-201ENST00000611259 610 ntBASIC17.13■□□□□ 0.33
RARAP10276 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.13■□□□□ 0.33
RARAP10276 AC092865.6-201ENST00000642101 219 ntBASIC17.13■□□□□ 0.33
RARAP10276 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RARAP10276 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RARAP10276 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RARAP10276 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.13■□□□□ 0.33
RARAP10276 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RARAP10276 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.13■□□□□ 0.33
RARAP10276 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RARAP10276 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RARAP10276 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RARAP10276 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RARAP10276 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
RARAP10276 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.13■□□□□ 0.33
RARAP10276 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RARAP10276 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RARAP10276 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 AC126177.1-201ENST00000547829 2218 ntBASIC17.12■□□□□ 0.33
RARAP10276 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.12■□□□□ 0.33
RARAP10276 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.12■□□□□ 0.33
RARAP10276 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RARAP10276 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.12■□□□□ 0.33
RARAP10276 MED15P5-201ENST00000423150 992 ntBASIC17.12■□□□□ 0.33
RARAP10276 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.12■□□□□ 0.33
RARAP10276 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.12■□□□□ 0.33
RARAP10276 AC074386.1-202ENST00000463561 864 ntBASIC17.12■□□□□ 0.33
RARAP10276 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.12■□□□□ 0.33
RARAP10276 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.12■□□□□ 0.33
RARAP10276 RNA5SP416-201ENST00000516838 111 ntBASIC17.12■□□□□ 0.33
RARAP10276 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.12■□□□□ 0.33
RARAP10276 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.12■□□□□ 0.33
RARAP10276 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.12■□□□□ 0.33
RARAP10276 PDPK2P-202ENST00000562415 1191 ntBASIC17.12■□□□□ 0.33
RARAP10276 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.12■□□□□ 0.33
RARAP10276 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RARAP10276 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.12■□□□□ 0.33
RARAP10276 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.12■□□□□ 0.33
RARAP10276 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.12■□□□□ 0.33
RARAP10276 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.12■□□□□ 0.33
RARAP10276 PRAL-201ENST00000624952 3286 ntBASIC17.12■□□□□ 0.33
RARAP10276 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RARAP10276 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.12■□□□□ 0.33
RARAP10276 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.12■□□□□ 0.33
RARAP10276 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.12■□□□□ 0.33
RARAP10276 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RARAP10276 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms