Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SP9P0CG40 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP9P0CG40 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP9P0CG40 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SP9P0CG40 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SP9P0CG40 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SP9P0CG40 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.8■□□□□ 0.12
SP9P0CG40 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP9P0CG40 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP9P0CG40 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP9P0CG40 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP9P0CG40 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP9P0CG40 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP9P0CG40 AC015818.8-201ENST00000587907 1519 ntBASIC15.8■□□□□ 0.12
SP9P0CG40 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.8■□□□□ 0.12
SP9P0CG40 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP9P0CG40 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.8■□□□□ 0.12
SP9P0CG40 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP9P0CG40 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP9P0CG40 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SP9P0CG40 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
SP9P0CG40 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SP9P0CG40 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.8■□□□□ 0.12
SP9P0CG40 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.8■□□□□ 0.12
SP9P0CG40 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.8■□□□□ 0.12
SP9P0CG40 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.8■□□□□ 0.12
SP9P0CG40 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SP9P0CG40 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.8■□□□□ 0.12
SP9P0CG40 NDUFV2P1-201ENST00000596415 907 ntBASIC15.8■□□□□ 0.12
SP9P0CG40 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.8■□□□□ 0.12
SP9P0CG40 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
SP9P0CG40 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP9P0CG40 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
SP9P0CG40 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SP9P0CG40 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.8■□□□□ 0.12
SP9P0CG40 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.8■□□□□ 0.12
SP9P0CG40 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SP9P0CG40 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
SP9P0CG40 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SP9P0CG40 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.79■□□□□ 0.12
SP9P0CG40 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.79■□□□□ 0.12
SP9P0CG40 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SP9P0CG40 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SP9P0CG40 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SP9P0CG40 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SP9P0CG40 MIR33B-201ENST00000385104 96 ntBASIC15.79■□□□□ 0.12
SP9P0CG40 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SP9P0CG40 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.79■□□□□ 0.12
SP9P0CG40 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.79■□□□□ 0.12
SP9P0CG40 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.79■□□□□ 0.12
SP9P0CG40 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.79■□□□□ 0.12
SP9P0CG40 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SP9P0CG40 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.79■□□□□ 0.12
SP9P0CG40 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.79■□□□□ 0.12
SP9P0CG40 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.79■□□□□ 0.12
SP9P0CG40 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.79■□□□□ 0.12
SP9P0CG40 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.79■□□□□ 0.12
SP9P0CG40 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.79■□□□□ 0.12
SP9P0CG40 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.79■□□□□ 0.12
SP9P0CG40 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.79■□□□□ 0.12
SP9P0CG40 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.79■□□□□ 0.12
SP9P0CG40 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.79■□□□□ 0.12
SP9P0CG40 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.79■□□□□ 0.12
SP9P0CG40 AL096828.3-201ENST00000615354 462 ntBASIC15.79■□□□□ 0.12
SP9P0CG40 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SP9P0CG40 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.79■□□□□ 0.12
SP9P0CG40 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SP9P0CG40 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms