Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCDC175P0C221 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC175P0C221 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC175P0C221 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC175P0C221 AC008677.1-201ENST00000519230 1561 ntBASIC17.66■□□□□ 0.42
CCDC175P0C221 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC175P0C221 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC175P0C221 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC175P0C221 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCDC175P0C221 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC175P0C221 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC175P0C221 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC175P0C221 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC175P0C221 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC175P0C221 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC175P0C221 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC175P0C221 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC175P0C221 AC104819.1-201ENST00000504587 486 ntBASIC17.66■□□□□ 0.42
CCDC175P0C221 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC175P0C221 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC175P0C221 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC175P0C221 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC175P0C221 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC175P0C221 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC175P0C221 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC175P0C221 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC175P0C221 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC175P0C221 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC175P0C221 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC175P0C221 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC175P0C221 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC175P0C221 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC175P0C221 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CCDC175P0C221 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC175P0C221 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC175P0C221 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC175P0C221 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC175P0C221 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC175P0C221 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC175P0C221 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC175P0C221 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC175P0C221 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC175P0C221 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC175P0C221 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC175P0C221 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC175P0C221 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CCDC175P0C221 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC175P0C221 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC175P0C221 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC175P0C221 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC175P0C221 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC175P0C221 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC175P0C221 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC175P0C221 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC175P0C221 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC175P0C221 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC175P0C221 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC175P0C221 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC175P0C221 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC175P0C221 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC175P0C221 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC175P0C221 SLC25A6P2-201ENST00000497974 877 ntBASIC17.65■□□□□ 0.42
CCDC175P0C221 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC175P0C221 AP001269.4-201ENST00000609611 512 ntBASIC17.65■□□□□ 0.42
CCDC175P0C221 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC175P0C221 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC175P0C221 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC175P0C221 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC175P0C221 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC175P0C221 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC175P0C221 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC175P0C221 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC175P0C221 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC175P0C221 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC175P0C221 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.64■□□□□ 0.42
CCDC175P0C221 PI4KAP1-204ENST00000612579 1703 ntBASIC17.64■□□□□ 0.41
CCDC175P0C221 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC175P0C221 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC175P0C221 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC175P0C221 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC175P0C221 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC175P0C221 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC175P0C221 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC175P0C221 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC175P0C221 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC175P0C221 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC175P0C221 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC175P0C221 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC175P0C221 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC175P0C221 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC175P0C221 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC175P0C221 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC175P0C221 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC175P0C221 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC175P0C221 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC175P0C221 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CCDC175P0C221 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC175P0C221 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC175P0C221 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC175P0C221 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms