Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC6P09630 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC6P09630 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.25■□□□□ 0.51
HOXC6P09630 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.25■□□□□ 0.51
HOXC6P09630 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.25■□□□□ 0.51
HOXC6P09630 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC6P09630 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.25■□□□□ 0.51
HOXC6P09630 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
HOXC6P09630 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.25■□□□□ 0.51
HOXC6P09630 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC6P09630 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.25■□□□□ 0.51
HOXC6P09630 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.25■□□□□ 0.51
HOXC6P09630 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HOXC6P09630 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC6P09630 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC6P09630 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
HOXC6P09630 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC6P09630 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HOXC6P09630 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC6P09630 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HOXC6P09630 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.24■□□□□ 0.51
HOXC6P09630 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC6P09630 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC6P09630 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC6P09630 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.24■□□□□ 0.51
HOXC6P09630 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC6P09630 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC6P09630 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.24■□□□□ 0.51
HOXC6P09630 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HOXC6P09630 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.24■□□□□ 0.51
HOXC6P09630 RPL13P2-201ENST00000440687 659 ntBASIC18.24■□□□□ 0.51
HOXC6P09630 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.24■□□□□ 0.51
HOXC6P09630 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.24■□□□□ 0.51
HOXC6P09630 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.24■□□□□ 0.51
HOXC6P09630 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.24■□□□□ 0.51
HOXC6P09630 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
HOXC6P09630 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.24■□□□□ 0.51
HOXC6P09630 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC6P09630 AC018665.1-201ENST00000622927 1362 ntBASIC18.24■□□□□ 0.51
HOXC6P09630 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.24■□□□□ 0.51
HOXC6P09630 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC6P09630 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC6P09630 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC6P09630 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC6P09630 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC6P09630 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC6P09630 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC6P09630 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.24■□□□□ 0.51
HOXC6P09630 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HOXC6P09630 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC6P09630 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC6P09630 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HOXC6P09630 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.23■□□□□ 0.51
HOXC6P09630 AC005915.1-201ENST00000624912 2018 ntBASIC18.23■□□□□ 0.51
HOXC6P09630 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.23■□□□□ 0.51
HOXC6P09630 AC105020.1-201ENST00000435356 2205 ntBASIC18.23■□□□□ 0.51
HOXC6P09630 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC6P09630 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.23■□□□□ 0.51
HOXC6P09630 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HOXC6P09630 OR6D1P-202ENST00000641007 5290 ntBASIC18.23■□□□□ 0.51
HOXC6P09630 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC6P09630 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC6P09630 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.23■□□□□ 0.51
HOXC6P09630 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
HOXC6P09630 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.23■□□□□ 0.51
HOXC6P09630 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC6P09630 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC6P09630 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
HOXC6P09630 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC6P09630 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC6P09630 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
HOXC6P09630 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.23■□□□□ 0.51
HOXC6P09630 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC6P09630 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HOXC6P09630 ACTG1P3-201ENST00000431775 1114 ntBASIC18.23■□□□□ 0.51
HOXC6P09630 ACTBP11-201ENST00000436287 1126 ntBASIC18.23■□□□□ 0.51
HOXC6P09630 SLC25A47P1-201ENST00000531577 414 ntBASIC18.23■□□□□ 0.51
HOXC6P09630 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.23■□□□□ 0.51
HOXC6P09630 AC036164.1-201ENST00000570544 333 ntBASIC18.23■□□□□ 0.51
HOXC6P09630 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.23■□□□□ 0.51
HOXC6P09630 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.23■□□□□ 0.51
HOXC6P09630 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.23■□□□□ 0.51
HOXC6P09630 LINC01115-203ENST00000606068 577 ntBASIC18.23■□□□□ 0.51
HOXC6P09630 AL158212.4-201ENST00000624062 1286 ntBASIC18.23■□□□□ 0.51
HOXC6P09630 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC6P09630 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC6P09630 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC6P09630 AC022211.2-201ENST00000585075 2527 ntBASIC18.23■□□□□ 0.51
HOXC6P09630 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.23■□□□□ 0.51
HOXC6P09630 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC6P09630 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC6P09630 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC6P09630 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.23■□□□□ 0.51
HOXC6P09630 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.23■□□□□ 0.51
HOXC6P09630 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC6P09630 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC6P09630 HTR7P1-202ENST00000624664 4411 ntBASIC18.22■□□□□ 0.51
HOXC6P09630 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC6P09630 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
HOXC6P09630 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms