Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GGPS1O95749 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
GGPS1O95749 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GGPS1O95749 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.23■□□□□ 0.51
GGPS1O95749 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
GGPS1O95749 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
GGPS1O95749 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
GGPS1O95749 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.23■□□□□ 0.51
GGPS1O95749 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GGPS1O95749 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.23■□□□□ 0.51
GGPS1O95749 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
GGPS1O95749 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.23■□□□□ 0.51
GGPS1O95749 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.23■□□□□ 0.51
GGPS1O95749 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GGPS1O95749 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.23■□□□□ 0.51
GGPS1O95749 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
GGPS1O95749 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
GGPS1O95749 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GGPS1O95749 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.23■□□□□ 0.51
GGPS1O95749 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.23■□□□□ 0.51
GGPS1O95749 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
GGPS1O95749 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GGPS1O95749 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GGPS1O95749 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GGPS1O95749 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GGPS1O95749 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.23■□□□□ 0.51
GGPS1O95749 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GGPS1O95749 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
GGPS1O95749 AC063926.2-201ENST00000623766 1308 ntBASIC18.23■□□□□ 0.51
GGPS1O95749 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GGPS1O95749 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GGPS1O95749 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GGPS1O95749 BTBD7P1-201ENST00000447253 1453 ntBASIC18.22■□□□□ 0.51
GGPS1O95749 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GGPS1O95749 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
GGPS1O95749 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.22■□□□□ 0.51
GGPS1O95749 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.22■□□□□ 0.51
GGPS1O95749 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GGPS1O95749 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
GGPS1O95749 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
GGPS1O95749 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GGPS1O95749 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.22■□□□□ 0.51
GGPS1O95749 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GGPS1O95749 AC104794.3-201ENST00000566840 1248 ntBASIC18.22■□□□□ 0.51
GGPS1O95749 AL132655.2-201ENST00000596276 594 ntBASIC18.22■□□□□ 0.51
GGPS1O95749 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GGPS1O95749 AL033527.5-202ENST00000641632 1098 ntBASIC18.22■□□□□ 0.51
GGPS1O95749 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GGPS1O95749 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GGPS1O95749 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GGPS1O95749 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GGPS1O95749 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GGPS1O95749 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
GGPS1O95749 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GGPS1O95749 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.22■□□□□ 0.51
GGPS1O95749 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.22■□□□□ 0.51
GGPS1O95749 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.22■□□□□ 0.51
GGPS1O95749 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GGPS1O95749 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GGPS1O95749 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
GGPS1O95749 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GGPS1O95749 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
GGPS1O95749 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.21■□□□□ 0.51
GGPS1O95749 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.21■□□□□ 0.51
GGPS1O95749 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GGPS1O95749 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.21■□□□□ 0.51
GGPS1O95749 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GGPS1O95749 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GGPS1O95749 GNAQP1-201ENST00000444815 1067 ntBASIC18.21■□□□□ 0.51
GGPS1O95749 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.21■□□□□ 0.51
GGPS1O95749 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GGPS1O95749 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.21■□□□□ 0.51
GGPS1O95749 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GGPS1O95749 MIR4321-201ENST00000592276 80 ntBASIC18.21■□□□□ 0.51
GGPS1O95749 AL365330.1-201ENST00000607459 531 ntBASIC18.21■□□□□ 0.51
GGPS1O95749 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GGPS1O95749 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.21■□□□□ 0.51
GGPS1O95749 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.21■□□□□ 0.51
GGPS1O95749 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.21■□□□□ 0.51
GGPS1O95749 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GGPS1O95749 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
GGPS1O95749 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GGPS1O95749 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GGPS1O95749 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
GGPS1O95749 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
GGPS1O95749 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
GGPS1O95749 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.21■□□□□ 0.5
GGPS1O95749 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
GGPS1O95749 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.2■□□□□ 0.5
GGPS1O95749 AC007541.1-201ENST00000570282 1469 ntBASIC18.2■□□□□ 0.5
GGPS1O95749 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GGPS1O95749 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GGPS1O95749 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
GGPS1O95749 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GGPS1O95749 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GGPS1O95749 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
GGPS1O95749 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
GGPS1O95749 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GGPS1O95749 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GGPS1O95749 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms