Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.23□□□□□ -0.13
UPK1BO75841 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.23□□□□□ -0.13
UPK1BO75841 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UPK1BO75841 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.23□□□□□ -0.13
UPK1BO75841 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.23□□□□□ -0.13
UPK1BO75841 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.23□□□□□ -0.13
UPK1BO75841 AL135905.2-201ENST00000584934 1404 ntBASIC14.23□□□□□ -0.13
UPK1BO75841 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
UPK1BO75841 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
UPK1BO75841 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
UPK1BO75841 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.22□□□□□ -0.13
UPK1BO75841 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 AC027601.5-201ENST00000624065 2482 ntBASIC14.22□□□□□ -0.13
UPK1BO75841 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
UPK1BO75841 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
UPK1BO75841 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
UPK1BO75841 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.22□□□□□ -0.13
UPK1BO75841 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.22□□□□□ -0.13
UPK1BO75841 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
UPK1BO75841 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.22□□□□□ -0.13
UPK1BO75841 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
UPK1BO75841 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.22□□□□□ -0.13
UPK1BO75841 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.22□□□□□ -0.13
UPK1BO75841 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.22□□□□□ -0.13
UPK1BO75841 AP005242.2-201ENST00000580065 1175 ntBASIC14.22□□□□□ -0.13
UPK1BO75841 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.22□□□□□ -0.13
UPK1BO75841 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 AC133041.1-202ENST00000642053 222 ntBASIC14.22□□□□□ -0.13
UPK1BO75841 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
UPK1BO75841 AL353593.2-201ENST00000602529 1483 ntBASIC14.22□□□□□ -0.13
UPK1BO75841 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
UPK1BO75841 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 SLC22A20-204ENST00000530038 1673 ntBASIC14.22□□□□□ -0.13
UPK1BO75841 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
UPK1BO75841 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.22□□□□□ -0.13
UPK1BO75841 AC132938.5-201ENST00000624980 1813 ntBASIC14.22□□□□□ -0.13
UPK1BO75841 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.22□□□□□ -0.13
UPK1BO75841 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.22□□□□□ -0.13
UPK1BO75841 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK1BO75841 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
UPK1BO75841 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UPK1BO75841 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
UPK1BO75841 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
UPK1BO75841 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
UPK1BO75841 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
UPK1BO75841 HSPA7-201ENST00000445535 1927 ntBASIC14.21□□□□□ -0.13
UPK1BO75841 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
UPK1BO75841 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UPK1BO75841 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.21□□□□□ -0.13
UPK1BO75841 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
UPK1BO75841 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.21□□□□□ -0.13
UPK1BO75841 CICP8-201ENST00000455800 2813 ntBASIC14.21□□□□□ -0.13
UPK1BO75841 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
UPK1BO75841 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
UPK1BO75841 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
UPK1BO75841 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.21□□□□□ -0.13
UPK1BO75841 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UPK1BO75841 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.21□□□□□ -0.13
UPK1BO75841 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UPK1BO75841 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.21□□□□□ -0.13
UPK1BO75841 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.21□□□□□ -0.13
UPK1BO75841 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UPK1BO75841 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UPK1BO75841 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.21□□□□□ -0.13
UPK1BO75841 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UPK1BO75841 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms