Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.39■□□□□ 0.21
RFPL1O75677 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RFPL1O75677 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RFPL1O75677 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.39■□□□□ 0.21
RFPL1O75677 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.39■□□□□ 0.21
RFPL1O75677 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.39■□□□□ 0.21
RFPL1O75677 DNAJB3-202ENST00000449667 1266 ntBASIC16.39■□□□□ 0.21
RFPL1O75677 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RFPL1O75677 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.39■□□□□ 0.21
RFPL1O75677 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.39■□□□□ 0.21
RFPL1O75677 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.39■□□□□ 0.21
RFPL1O75677 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.39■□□□□ 0.21
RFPL1O75677 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 GGTLC5P-201ENST00000617623 998 ntBASIC16.39■□□□□ 0.21
RFPL1O75677 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.39■□□□□ 0.21
RFPL1O75677 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.39■□□□□ 0.21
RFPL1O75677 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.39■□□□□ 0.21
RFPL1O75677 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.39■□□□□ 0.21
RFPL1O75677 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.39■□□□□ 0.21
RFPL1O75677 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
RFPL1O75677 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RFPL1O75677 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RFPL1O75677 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RFPL1O75677 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RFPL1O75677 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFPL1O75677 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFPL1O75677 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFPL1O75677 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.38■□□□□ 0.21
RFPL1O75677 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFPL1O75677 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RFPL1O75677 AC092850.2-201ENST00000623821 2697 ntBASIC16.38■□□□□ 0.21
RFPL1O75677 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFPL1O75677 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFPL1O75677 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.38■□□□□ 0.21
RFPL1O75677 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFPL1O75677 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RFPL1O75677 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
RFPL1O75677 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
RFPL1O75677 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.38■□□□□ 0.21
RFPL1O75677 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.38■□□□□ 0.21
RFPL1O75677 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFPL1O75677 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.38■□□□□ 0.21
RFPL1O75677 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.38■□□□□ 0.21
RFPL1O75677 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.38■□□□□ 0.21
RFPL1O75677 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.38■□□□□ 0.21
RFPL1O75677 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.38■□□□□ 0.21
RFPL1O75677 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.38■□□□□ 0.21
RFPL1O75677 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFPL1O75677 MST1L-201ENST00000442552 2185 ntBASIC16.38■□□□□ 0.21
RFPL1O75677 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.38■□□□□ 0.21
RFPL1O75677 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RFPL1O75677 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFPL1O75677 AC008677.1-201ENST00000519230 1561 ntBASIC16.38■□□□□ 0.21
RFPL1O75677 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFPL1O75677 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFPL1O75677 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFPL1O75677 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.37■□□□□ 0.21
RFPL1O75677 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RFPL1O75677 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFPL1O75677 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFPL1O75677 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.37■□□□□ 0.21
RFPL1O75677 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
RFPL1O75677 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFPL1O75677 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFPL1O75677 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.37■□□□□ 0.21
RFPL1O75677 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RFPL1O75677 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
RFPL1O75677 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFPL1O75677 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFPL1O75677 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RFPL1O75677 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.37■□□□□ 0.21
RFPL1O75677 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFPL1O75677 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RFPL1O75677 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFPL1O75677 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.37■□□□□ 0.21
RFPL1O75677 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.37■□□□□ 0.21
RFPL1O75677 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFPL1O75677 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.37■□□□□ 0.21
RFPL1O75677 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.37■□□□□ 0.21
RFPL1O75677 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.37■□□□□ 0.21
RFPL1O75677 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.37■□□□□ 0.21
RFPL1O75677 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.37■□□□□ 0.21
RFPL1O75677 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.37■□□□□ 0.21
RFPL1O75677 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.37■□□□□ 0.21
RFPL1O75677 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RFPL1O75677 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms