Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
USH2AO75445 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
USH2AO75445 EML3-217ENST00000531557 2509 ntTSL 5 BASIC7.12□□□□□ -1.27
USH2AO75445 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC7.12□□□□□ -1.27
USH2AO75445 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC7.12□□□□□ -1.27
USH2AO75445 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC7.12□□□□□ -1.27
USH2AO75445 AC024681.1-201ENST00000521917 487 ntBASIC7.12□□□□□ -1.27
USH2AO75445 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC7.12□□□□□ -1.27
USH2AO75445 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC7.12□□□□□ -1.27
USH2AO75445 RN7SL48P-201ENST00000579283 293 ntBASIC7.12□□□□□ -1.27
USH2AO75445 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
USH2AO75445 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
USH2AO75445 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC7.12□□□□□ -1.27
USH2AO75445 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
USH2AO75445 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC7.12□□□□□ -1.27
USH2AO75445 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
USH2AO75445 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC7.12□□□□□ -1.27
USH2AO75445 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC7.12□□□□□ -1.27
USH2AO75445 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
USH2AO75445 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC7.12□□□□□ -1.27
USH2AO75445 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
USH2AO75445 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
USH2AO75445 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC7.12□□□□□ -1.27
USH2AO75445 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
USH2AO75445 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
USH2AO75445 UROS-201ENST00000368774 744 ntTSL 2 BASIC7.12□□□□□ -1.27
USH2AO75445 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
USH2AO75445 AL357373.1-201ENST00000394974 322 ntBASIC7.12□□□□□ -1.27
USH2AO75445 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
USH2AO75445 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
USH2AO75445 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
USH2AO75445 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC7.12□□□□□ -1.27
USH2AO75445 AL139010.1-201ENST00000454878 894 ntBASIC7.12□□□□□ -1.27
USH2AO75445 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
USH2AO75445 NSD1-211ENST00000511258 809 ntTSL 3 BASIC7.12□□□□□ -1.27
USH2AO75445 GPX4-206ENST00000588919 803 ntTSL 2 BASIC7.12□□□□□ -1.27
USH2AO75445 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC7.12□□□□□ -1.27
USH2AO75445 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
USH2AO75445 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
USH2AO75445 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
USH2AO75445 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
USH2AO75445 AC092068.3-201ENST00000587894 2016 ntBASIC7.12□□□□□ -1.27
USH2AO75445 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
USH2AO75445 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
USH2AO75445 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
USH2AO75445 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
USH2AO75445 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
USH2AO75445 AC134915.1-201ENST00000426461 574 ntBASIC7.12□□□□□ -1.27
USH2AO75445 AC093724.1-201ENST00000448659 1027 ntBASIC7.12□□□□□ -1.27
USH2AO75445 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC7.12□□□□□ -1.27
USH2AO75445 AC012618.1-201ENST00000461223 412 ntBASIC7.12□□□□□ -1.27
USH2AO75445 IGLV3-15-201ENST00000518356 244 ntBASIC7.12□□□□□ -1.27
USH2AO75445 NEU3-205ENST00000531619 582 ntTSL 5 BASIC7.12□□□□□ -1.27
USH2AO75445 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC7.12□□□□□ -1.27
USH2AO75445 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
USH2AO75445 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC7.12□□□□□ -1.27
USH2AO75445 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
USH2AO75445 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC7.11□□□□□ -1.27
USH2AO75445 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
USH2AO75445 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC7.11□□□□□ -1.27
USH2AO75445 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC7.11□□□□□ -1.27
USH2AO75445 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC7.11□□□□□ -1.27
USH2AO75445 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC7.11□□□□□ -1.27
USH2AO75445 RTN3P1-201ENST00000536295 711 ntBASIC7.11□□□□□ -1.27
USH2AO75445 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC7.11□□□□□ -1.27
USH2AO75445 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
USH2AO75445 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC7.11□□□□□ -1.27
USH2AO75445 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
USH2AO75445 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 AL138709.1-201ENST00000614840 1693 ntBASIC7.11□□□□□ -1.27
USH2AO75445 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC7.11□□□□□ -1.27
USH2AO75445 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
USH2AO75445 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 BAATP1-201ENST00000412284 1225 ntBASIC7.11□□□□□ -1.27
USH2AO75445 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
USH2AO75445 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC7.11□□□□□ -1.27
USH2AO75445 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC7.11□□□□□ -1.27
USH2AO75445 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC7.11□□□□□ -1.27
USH2AO75445 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms