Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.21■□□□□ 0.83
CACNA1FO60840 COX20P2-201ENST00000452636 358 ntBASIC20.21■□□□□ 0.83
CACNA1FO60840 AL589987.1-201ENST00000453380 819 ntBASIC20.21■□□□□ 0.83
CACNA1FO60840 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.21■□□□□ 0.83
CACNA1FO60840 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC20.21■□□□□ 0.83
CACNA1FO60840 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CACNA1FO60840 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CACNA1FO60840 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC20.21■□□□□ 0.83
CACNA1FO60840 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CACNA1FO60840 AF228730.6-201ENST00000641497 218 ntBASIC20.21■□□□□ 0.83
CACNA1FO60840 AL645728.2-202ENST00000641679 227 ntBASIC20.21■□□□□ 0.83
CACNA1FO60840 AC084121.3-201ENST00000641716 218 ntBASIC20.21■□□□□ 0.83
CACNA1FO60840 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CACNA1FO60840 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CACNA1FO60840 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1FO60840 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1FO60840 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1FO60840 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1FO60840 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1FO60840 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC20.2■□□□□ 0.82
CACNA1FO60840 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1FO60840 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1FO60840 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.2■□□□□ 0.82
CACNA1FO60840 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.2■□□□□ 0.82
CACNA1FO60840 KRT18P64-201ENST00000434946 1219 ntBASIC20.2■□□□□ 0.82
CACNA1FO60840 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1FO60840 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1FO60840 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.2■□□□□ 0.82
CACNA1FO60840 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CACNA1FO60840 AC092364.2-202ENST00000597012 1073 ntBASIC20.2■□□□□ 0.82
CACNA1FO60840 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1FO60840 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
CACNA1FO60840 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC20.2■□□□□ 0.82
CACNA1FO60840 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1FO60840 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1FO60840 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1FO60840 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1FO60840 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CACNA1FO60840 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1FO60840 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.2■□□□□ 0.82
CACNA1FO60840 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1FO60840 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1FO60840 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.19■□□□□ 0.82
CACNA1FO60840 AC093004.1-201ENST00000508850 424 ntBASIC20.19■□□□□ 0.82
CACNA1FO60840 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1FO60840 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1FO60840 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CACNA1FO60840 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.19■□□□□ 0.82
CACNA1FO60840 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1FO60840 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.19■□□□□ 0.82
CACNA1FO60840 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1FO60840 SPDYE19P-201ENST00000338590 713 ntBASIC20.19■□□□□ 0.82
CACNA1FO60840 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.19■□□□□ 0.82
CACNA1FO60840 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.19■□□□□ 0.82
CACNA1FO60840 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.19■□□□□ 0.82
CACNA1FO60840 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CACNA1FO60840 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1FO60840 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CACNA1FO60840 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.19■□□□□ 0.82
CACNA1FO60840 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1FO60840 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CACNA1FO60840 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CACNA1FO60840 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CACNA1FO60840 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.18■□□□□ 0.82
CACNA1FO60840 AL607033.1-201ENST00000623900 1599 ntBASIC20.18■□□□□ 0.82
CACNA1FO60840 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CACNA1FO60840 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CACNA1FO60840 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CACNA1FO60840 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CACNA1FO60840 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CACNA1FO60840 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CACNA1FO60840 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
CACNA1FO60840 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.18■□□□□ 0.82
CACNA1FO60840 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CACNA1FO60840 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC20.18■□□□□ 0.82
CACNA1FO60840 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CACNA1FO60840 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.18■□□□□ 0.82
CACNA1FO60840 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.18■□□□□ 0.82
CACNA1FO60840 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CACNA1FO60840 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CACNA1FO60840 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.18■□□□□ 0.82
CACNA1FO60840 AC007431.3-201ENST00000623221 587 ntBASIC20.18■□□□□ 0.82
CACNA1FO60840 AC025048.6-201ENST00000634326 1161 ntBASIC20.18■□□□□ 0.82
CACNA1FO60840 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CACNA1FO60840 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CACNA1FO60840 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC20.18■□□□□ 0.82
CACNA1FO60840 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CACNA1FO60840 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CACNA1FO60840 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC20.18■□□□□ 0.82
CACNA1FO60840 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CACNA1FO60840 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CACNA1FO60840 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CACNA1FO60840 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CACNA1FO60840 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNA1FO60840 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNA1FO60840 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNA1FO60840 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.17■□□□□ 0.82
CACNA1FO60840 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.17■□□□□ 0.82
CACNA1FO60840 AC015922.1-201ENST00000421102 1152 ntBASIC20.17■□□□□ 0.82
CACNA1FO60840 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms