Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.93■□□□□ 0.62
CTNND1O60716 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CTNND1O60716 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CTNND1O60716 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.92■□□□□ 0.62
CTNND1O60716 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.92■□□□□ 0.62
CTNND1O60716 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
CTNND1O60716 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.92■□□□□ 0.62
CTNND1O60716 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.92■□□□□ 0.62
CTNND1O60716 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.92■□□□□ 0.62
CTNND1O60716 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.92■□□□□ 0.62
CTNND1O60716 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.92■□□□□ 0.62
CTNND1O60716 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 MIR1909-201ENST00000411312 80 ntBASIC18.92■□□□□ 0.62
CTNND1O60716 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CTNND1O60716 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.92■□□□□ 0.62
CTNND1O60716 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.92■□□□□ 0.62
CTNND1O60716 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.92■□□□□ 0.62
CTNND1O60716 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.92■□□□□ 0.62
CTNND1O60716 WFDC1-204ENST00000613603 549 ntBASIC18.92■□□□□ 0.62
CTNND1O60716 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CTNND1O60716 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CTNND1O60716 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CTNND1O60716 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CTNND1O60716 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTNND1O60716 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTNND1O60716 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTNND1O60716 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CTNND1O60716 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTNND1O60716 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CTNND1O60716 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CTNND1O60716 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.91■□□□□ 0.62
CTNND1O60716 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTNND1O60716 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTNND1O60716 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTNND1O60716 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTNND1O60716 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTNND1O60716 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTNND1O60716 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTNND1O60716 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.91■□□□□ 0.62
CTNND1O60716 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.91■□□□□ 0.62
CTNND1O60716 RPS2P32-201ENST00000439199 892 ntBASIC18.91■□□□□ 0.62
CTNND1O60716 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.91■□□□□ 0.62
CTNND1O60716 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CTNND1O60716 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.91■□□□□ 0.62
CTNND1O60716 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.91■□□□□ 0.62
CTNND1O60716 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTNND1O60716 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTNND1O60716 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTNND1O60716 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTNND1O60716 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CTNND1O60716 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CTNND1O60716 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.91■□□□□ 0.62
CTNND1O60716 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTNND1O60716 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTNND1O60716 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CTNND1O60716 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.9■□□□□ 0.62
CTNND1O60716 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.9■□□□□ 0.62
CTNND1O60716 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNND1O60716 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNND1O60716 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CTNND1O60716 Z97205.2-201ENST00000564697 1639 ntBASIC18.9■□□□□ 0.62
CTNND1O60716 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNND1O60716 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNND1O60716 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.9■□□□□ 0.62
CTNND1O60716 AC022210.1-201ENST00000449856 793 ntBASIC18.9■□□□□ 0.62
CTNND1O60716 AC007389.4-201ENST00000454674 793 ntBASIC18.9■□□□□ 0.62
CTNND1O60716 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.9■□□□□ 0.62
CTNND1O60716 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.9■□□□□ 0.62
CTNND1O60716 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNND1O60716 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNND1O60716 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.9■□□□□ 0.62
CTNND1O60716 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.9■□□□□ 0.62
CTNND1O60716 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CTNND1O60716 AC124067.4-201ENST00000519691 2379 ntBASIC18.9■□□□□ 0.62
CTNND1O60716 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNND1O60716 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNND1O60716 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNND1O60716 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNND1O60716 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms