Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SORBS3O60504 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SORBS3O60504 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.32■□□□□ 0.52
SORBS3O60504 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SORBS3O60504 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SORBS3O60504 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SORBS3O60504 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
SORBS3O60504 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SORBS3O60504 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SORBS3O60504 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SORBS3O60504 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
SORBS3O60504 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.32■□□□□ 0.52
SORBS3O60504 AC009477.1-201ENST00000452936 217 ntBASIC18.32■□□□□ 0.52
SORBS3O60504 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SORBS3O60504 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SORBS3O60504 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SORBS3O60504 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SORBS3O60504 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SORBS3O60504 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.32■□□□□ 0.52
SORBS3O60504 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.32■□□□□ 0.52
SORBS3O60504 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SORBS3O60504 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SORBS3O60504 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SORBS3O60504 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SORBS3O60504 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SORBS3O60504 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SORBS3O60504 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SORBS3O60504 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SORBS3O60504 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SORBS3O60504 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.31■□□□□ 0.52
SORBS3O60504 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SORBS3O60504 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.31■□□□□ 0.52
SORBS3O60504 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SORBS3O60504 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SORBS3O60504 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SORBS3O60504 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SORBS3O60504 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.31■□□□□ 0.52
SORBS3O60504 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SORBS3O60504 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SORBS3O60504 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.31■□□□□ 0.52
SORBS3O60504 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.31■□□□□ 0.52
SORBS3O60504 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SORBS3O60504 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.31■□□□□ 0.52
SORBS3O60504 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.31■□□□□ 0.52
SORBS3O60504 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.31■□□□□ 0.52
SORBS3O60504 AL512361.1-201ENST00000554200 418 ntBASIC18.31■□□□□ 0.52
SORBS3O60504 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.31■□□□□ 0.52
SORBS3O60504 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.31■□□□□ 0.52
SORBS3O60504 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SORBS3O60504 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
SORBS3O60504 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SORBS3O60504 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
SORBS3O60504 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SORBS3O60504 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SORBS3O60504 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.31■□□□□ 0.52
SORBS3O60504 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SORBS3O60504 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
SORBS3O60504 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SORBS3O60504 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SORBS3O60504 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.31■□□□□ 0.52
SORBS3O60504 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SORBS3O60504 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SORBS3O60504 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SORBS3O60504 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SORBS3O60504 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SORBS3O60504 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SORBS3O60504 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.3■□□□□ 0.52
SORBS3O60504 AC087499.5-201ENST00000452760 1342 ntBASIC18.3■□□□□ 0.52
SORBS3O60504 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SORBS3O60504 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SORBS3O60504 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SORBS3O60504 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.3■□□□□ 0.52
SORBS3O60504 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.3■□□□□ 0.52
SORBS3O60504 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SORBS3O60504 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SORBS3O60504 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SORBS3O60504 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SORBS3O60504 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SORBS3O60504 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SORBS3O60504 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SORBS3O60504 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.3■□□□□ 0.52
SORBS3O60504 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.3■□□□□ 0.52
SORBS3O60504 CRB3P1-201ENST00000449338 276 ntBASIC18.3■□□□□ 0.52
SORBS3O60504 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.3■□□□□ 0.52
SORBS3O60504 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.3■□□□□ 0.52
SORBS3O60504 SPDYE18-201ENST00000510091 1050 ntBASIC18.3■□□□□ 0.52
SORBS3O60504 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.3■□□□□ 0.52
SORBS3O60504 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.3■□□□□ 0.52
SORBS3O60504 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.3■□□□□ 0.52
SORBS3O60504 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.3■□□□□ 0.52
SORBS3O60504 AC012645.4-201ENST00000610691 1061 ntBASIC18.3■□□□□ 0.52
SORBS3O60504 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.3■□□□□ 0.52
SORBS3O60504 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.3■□□□□ 0.52
SORBS3O60504 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
SORBS3O60504 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SORBS3O60504 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SORBS3O60504 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
SORBS3O60504 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SORBS3O60504 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SORBS3O60504 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms