Protein–RNA interactions for Protein: O43739

CYTH3, Cytohesin-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3O43739 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CYTH3O43739 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CYTH3O43739 MRPS18AP1-201ENST00000414458 589 ntBASIC18.65■□□□□ 0.58
CYTH3O43739 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CYTH3O43739 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.65■□□□□ 0.58
CYTH3O43739 IGHV3-42-201ENST00000520410 361 ntBASIC18.65■□□□□ 0.58
CYTH3O43739 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.65■□□□□ 0.58
CYTH3O43739 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.65■□□□□ 0.58
CYTH3O43739 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.65■□□□□ 0.58
CYTH3O43739 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.65■□□□□ 0.58
CYTH3O43739 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CYTH3O43739 AC026979.3-201ENST00000607315 403 ntBASIC18.65■□□□□ 0.58
CYTH3O43739 AL844908.2-201ENST00000609461 460 ntBASIC18.65■□□□□ 0.58
CYTH3O43739 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CYTH3O43739 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CYTH3O43739 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CYTH3O43739 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CYTH3O43739 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.65■□□□□ 0.58
CYTH3O43739 KRT8P12-202ENST00000472924 1397 ntBASIC18.65■□□□□ 0.58
CYTH3O43739 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CYTH3O43739 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CYTH3O43739 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CYTH3O43739 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CYTH3O43739 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CYTH3O43739 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CYTH3O43739 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CYTH3O43739 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.65■□□□□ 0.58
CYTH3O43739 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CYTH3O43739 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CYTH3O43739 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CYTH3O43739 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.64■□□□□ 0.58
CYTH3O43739 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CYTH3O43739 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CYTH3O43739 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CYTH3O43739 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CYTH3O43739 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.64■□□□□ 0.57
CYTH3O43739 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CYTH3O43739 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.64■□□□□ 0.57
CYTH3O43739 LINC02199-201ENST00000506655 2702 ntBASIC18.64■□□□□ 0.57
CYTH3O43739 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CYTH3O43739 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CYTH3O43739 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.64■□□□□ 0.57
CYTH3O43739 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CYTH3O43739 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CYTH3O43739 AC241585.1-201ENST00000433527 519 ntBASIC18.64■□□□□ 0.57
CYTH3O43739 HIST3H2BA-201ENST00000436555 524 ntBASIC18.64■□□□□ 0.57
CYTH3O43739 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.64■□□□□ 0.57
CYTH3O43739 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CYTH3O43739 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.64■□□□□ 0.57
CYTH3O43739 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.64■□□□□ 0.57
CYTH3O43739 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CYTH3O43739 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CYTH3O43739 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
CYTH3O43739 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CYTH3O43739 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CYTH3O43739 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CYTH3O43739 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CYTH3O43739 AC134407.2-201ENST00000625089 1978 ntBASIC18.64■□□□□ 0.57
CYTH3O43739 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CYTH3O43739 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.64■□□□□ 0.57
CYTH3O43739 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CYTH3O43739 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
CYTH3O43739 BNIP3P1-202ENST00000550043 1585 ntBASIC18.64■□□□□ 0.57
CYTH3O43739 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CYTH3O43739 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.63■□□□□ 0.57
CYTH3O43739 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.63■□□□□ 0.57
CYTH3O43739 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CYTH3O43739 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CYTH3O43739 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CYTH3O43739 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.63■□□□□ 0.57
CYTH3O43739 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CYTH3O43739 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CYTH3O43739 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CYTH3O43739 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.63■□□□□ 0.57
CYTH3O43739 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CYTH3O43739 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CYTH3O43739 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CYTH3O43739 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.63■□□□□ 0.57
CYTH3O43739 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CYTH3O43739 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CYTH3O43739 AL512361.1-201ENST00000554200 418 ntBASIC18.63■□□□□ 0.57
CYTH3O43739 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.63■□□□□ 0.57
CYTH3O43739 AL096865.1-201ENST00000606796 927 ntBASIC18.63■□□□□ 0.57
CYTH3O43739 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.63■□□□□ 0.57
CYTH3O43739 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.63■□□□□ 0.57
CYTH3O43739 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CYTH3O43739 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CYTH3O43739 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CYTH3O43739 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CYTH3O43739 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CYTH3O43739 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CYTH3O43739 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.63■□□□□ 0.57
CYTH3O43739 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CYTH3O43739 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CYTH3O43739 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CYTH3O43739 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CYTH3O43739 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CYTH3O43739 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CYTH3O43739 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CYTH3O43739 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms