Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.54■□□□□ 0.08
CASQ2O14958 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.53■□□□□ 0.08
CASQ2O14958 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.53■□□□□ 0.08
CASQ2O14958 AC232323.1-201ENST00000540724 2099 ntBASIC15.53■□□□□ 0.08
CASQ2O14958 REXO1L5P-201ENST00000622260 2098 ntBASIC15.53■□□□□ 0.08
CASQ2O14958 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.53■□□□□ 0.08
CASQ2O14958 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
CASQ2O14958 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
CASQ2O14958 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.53■□□□□ 0.08
CASQ2O14958 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.53■□□□□ 0.08
CASQ2O14958 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
CASQ2O14958 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.53■□□□□ 0.08
CASQ2O14958 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CASQ2O14958 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.53■□□□□ 0.08
CASQ2O14958 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.53■□□□□ 0.08
CASQ2O14958 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 FAM220CP-201ENST00000395253 831 ntBASIC15.53■□□□□ 0.08
CASQ2O14958 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.53■□□□□ 0.08
CASQ2O14958 ACTG1P4-201ENST00000425123 1122 ntBASIC15.53■□□□□ 0.08
CASQ2O14958 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.53■□□□□ 0.08
CASQ2O14958 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.53■□□□□ 0.08
CASQ2O14958 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CASQ2O14958 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.53■□□□□ 0.08
CASQ2O14958 GPR32P1-201ENST00000601788 811 ntBASIC15.53■□□□□ 0.08
CASQ2O14958 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.53■□□□□ 0.08
CASQ2O14958 AC010654.1-201ENST00000615722 808 ntBASIC15.53■□□□□ 0.08
CASQ2O14958 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.53■□□□□ 0.08
CASQ2O14958 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.53■□□□□ 0.08
CASQ2O14958 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.53■□□□□ 0.08
CASQ2O14958 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CASQ2O14958 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CASQ2O14958 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
CASQ2O14958 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.53■□□□□ 0.08
CASQ2O14958 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CASQ2O14958 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.53■□□□□ 0.08
CASQ2O14958 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CASQ2O14958 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CASQ2O14958 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CASQ2O14958 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CASQ2O14958 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.53■□□□□ 0.08
CASQ2O14958 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CASQ2O14958 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CASQ2O14958 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CASQ2O14958 KRT8P39-201ENST00000396270 1433 ntBASIC15.52■□□□□ 0.08
CASQ2O14958 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.52■□□□□ 0.08
CASQ2O14958 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CASQ2O14958 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CASQ2O14958 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CASQ2O14958 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
CASQ2O14958 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CASQ2O14958 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CASQ2O14958 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CASQ2O14958 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CASQ2O14958 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.52■□□□□ 0.08
CASQ2O14958 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CASQ2O14958 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CASQ2O14958 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CASQ2O14958 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CASQ2O14958 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.52■□□□□ 0.08
CASQ2O14958 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CASQ2O14958 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.52■□□□□ 0.08
CASQ2O14958 GCSHP2-201ENST00000560971 527 ntBASIC15.52■□□□□ 0.08
CASQ2O14958 AP001412.1-201ENST00000608405 714 ntBASIC15.52■□□□□ 0.08
CASQ2O14958 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
CASQ2O14958 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CASQ2O14958 FAM197Y4-202ENST00000622692 608 ntBASIC15.52■□□□□ 0.08
CASQ2O14958 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CASQ2O14958 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CASQ2O14958 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CASQ2O14958 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CASQ2O14958 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CASQ2O14958 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.52■□□□□ 0.07
CASQ2O14958 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CASQ2O14958 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CASQ2O14958 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CASQ2O14958 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CASQ2O14958 AC087481.3-201ENST00000602886 1894 ntBASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms