Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.34■□□□□ 0.37
RCCD1A6NED2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RCCD1A6NED2 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RCCD1A6NED2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RCCD1A6NED2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.34■□□□□ 0.37
RCCD1A6NED2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RCCD1A6NED2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.34■□□□□ 0.37
RCCD1A6NED2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.34■□□□□ 0.37
RCCD1A6NED2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.34■□□□□ 0.37
RCCD1A6NED2 UNC93B7-201ENST00000509439 705 ntBASIC17.34■□□□□ 0.37
RCCD1A6NED2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.34■□□□□ 0.37
RCCD1A6NED2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.34■□□□□ 0.37
RCCD1A6NED2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.34■□□□□ 0.37
RCCD1A6NED2 AC105339.3-201ENST00000560043 636 ntBASIC17.34■□□□□ 0.37
RCCD1A6NED2 PRELID1P1-202ENST00000567272 903 ntBASIC17.34■□□□□ 0.37
RCCD1A6NED2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RCCD1A6NED2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.34■□□□□ 0.37
RCCD1A6NED2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.34■□□□□ 0.37
RCCD1A6NED2 AC021097.1-201ENST00000607902 574 ntBASIC17.34■□□□□ 0.37
RCCD1A6NED2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RCCD1A6NED2 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RCCD1A6NED2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RCCD1A6NED2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RCCD1A6NED2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.33■□□□□ 0.37
RCCD1A6NED2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RCCD1A6NED2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RCCD1A6NED2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RCCD1A6NED2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RCCD1A6NED2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
RCCD1A6NED2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RCCD1A6NED2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RCCD1A6NED2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
RCCD1A6NED2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
RCCD1A6NED2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RCCD1A6NED2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RCCD1A6NED2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RCCD1A6NED2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.33■□□□□ 0.36
RCCD1A6NED2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.33■□□□□ 0.36
RCCD1A6NED2 HAUS4P1-201ENST00000406739 1145 ntBASIC17.33■□□□□ 0.36
RCCD1A6NED2 AC018712.1-201ENST00000455767 687 ntBASIC17.33■□□□□ 0.36
RCCD1A6NED2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.33■□□□□ 0.36
RCCD1A6NED2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.33■□□□□ 0.36
RCCD1A6NED2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.33■□□□□ 0.36
RCCD1A6NED2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.33■□□□□ 0.36
RCCD1A6NED2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RCCD1A6NED2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RCCD1A6NED2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.33■□□□□ 0.36
RCCD1A6NED2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RCCD1A6NED2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.33■□□□□ 0.36
RCCD1A6NED2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RCCD1A6NED2 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RCCD1A6NED2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RCCD1A6NED2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RCCD1A6NED2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RCCD1A6NED2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RCCD1A6NED2 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.33■□□□□ 0.36
RCCD1A6NED2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RCCD1A6NED2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RCCD1A6NED2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.33■□□□□ 0.36
RCCD1A6NED2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RCCD1A6NED2 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.32■□□□□ 0.36
RCCD1A6NED2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
RCCD1A6NED2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RCCD1A6NED2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.32■□□□□ 0.36
RCCD1A6NED2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.32■□□□□ 0.36
RCCD1A6NED2 IFNL4P1-201ENST00000607083 540 ntBASIC17.32■□□□□ 0.36
RCCD1A6NED2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.32■□□□□ 0.36
RCCD1A6NED2 AC148477.8-201ENST00000624298 468 ntBASIC17.32■□□□□ 0.36
RCCD1A6NED2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.32■□□□□ 0.36
RCCD1A6NED2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.32■□□□□ 0.36
RCCD1A6NED2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 AC009090.5-201ENST00000624886 2285 ntBASIC17.32■□□□□ 0.36
RCCD1A6NED2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
RCCD1A6NED2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
RCCD1A6NED2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCCD1A6NED2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms