Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF103-CHMP3A0A140T963 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF103-CHMP3A0A140T963 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF103-CHMP3A0A140T963 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF103-CHMP3A0A140T963 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF103-CHMP3A0A140T963 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF103-CHMP3A0A140T963 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 AC006504.4-201ENST00000592118 1568 ntBASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 AC002310.6-201ENST00000624451 1377 ntBASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 LAGE3P1-201ENST00000425356 484 ntBASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 AC021087.4-201ENST00000563761 564 ntBASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 AC006557.2-201ENST00000592985 1240 ntBASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 AC012313.10-201ENST00000623509 926 ntBASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 AL805961.1-202ENST00000641562 540 ntBASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 AF228730.7-201ENST00000641842 219 ntBASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 MYO15B-237ENST00000642007 4893 ntBASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RNF103-CHMP3A0A140T963 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 AF238378.1-201ENST00000526806 358 ntBASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 MPDU1-223ENST00000582151 728 ntBASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 IFNL4P1-201ENST00000607083 540 ntBASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms